Gene Pmen_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3243 
Symbol 
ID5106750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3594292 
End bp3594696 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID640504500 
Producthypothetical protein 
Protein accessionYP_001188728 
Protein GI146308263 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGT GCAAGCGGGT GTATCTCGAC GCCGCCGCGG ACGACGGTCG CCGCGTGCTG 
GTCGACCGAC TATGGCCGCG CGGCCTGGCC AAGGACCGGC TGCCACTCGA TGCCTGGCTG
CCACAAGTAG CGCCCTCCGC CGCGCTGCGC AAGGCCTTCG CTCATCGACC GGAGGCTTTC
GAGGACTTCT GCAGCGCCTA CCGGCGGGAA CTGGCCGGCC ATCCCGAACA CTGGCAACCG
CTGCTGCACT GGGCCGCCAG TGGCCGCCTT ACCCTGCTGT ATGCCGCCCG CGACGAGACG
CACAACAACG CGCGGGTGCT GGCCGAGTTT CTCGAAGACG AGTGGGAGCG CAAAGGCTCG
CCCAGTTCGC CGGTCTGTTA CCAGGGCGAG TTCGGCGGCG GTTGA
 
Protein sequence
MIQCKRVYLD AAADDGRRVL VDRLWPRGLA KDRLPLDAWL PQVAPSAALR KAFAHRPEAF 
EDFCSAYRRE LAGHPEHWQP LLHWAASGRL TLLYAARDET HNNARVLAEF LEDEWERKGS
PSSPVCYQGE FGGG