Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3208 |
Symbol | |
ID | 5106537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3547696 |
End bp | 3548514 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640504465 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_001188693 |
Protein GI | 146308228 |
COG category | [R] General function prediction only |
COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.485932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAA GAGTACTGAT CATCTATGCC CATCCCGAGC CTTCGTCGCT AACGCGGCAA CTGGTGGATG TGTCTGTTGA ATGCTTGACT GCGCAAGGGC ACGAGGTCCT GCAGTCCGAT CTATACGCCA TGGGCTGGAA AGCGATATTC GACGAGCACG ACTTCCCTGA GCGGGCCAAC CCTCAGCGGC TGTCGTTCGG CGCAGAGTCC GCCCACGCCT ATCGTTATCG CCGCCAGAGC CCTGACGTGG CGGCAGAGCA AGACAAGGTC CTAGCGGCAG ATGCCGTCAT CTTCCAGTTT CCACTTTGGT GGTACGGCAT GCCGGCCATC ATGAAGGGAT GGATCGACCG CGTCTGGGCA GCCGGACTCG CCCATGGCTA CAAGGGCGCT GGCAACACCT ACCGCTATGG TGACGGAGCC TTCAAGGGCA AACGGGCCAT GTTGTCGGTC GCTGTCGGCG GCCCCGCAGA AGATTACTCG CCGCGCGGTA TCAACGGACC ACTCGAGCAG TTGCTGTTTC CGATCACGCA TGGCTCGCTC TACTTCCCCG GGTTCGATGT GCTGCCGACG TTCGCCATAT ACGGCACTGG CAACTTGACC GCCGCAGATG TCATGGCAGC CAAAGAGGCT TGGCGTGCTC GTCTCGCGGA TTTGTTCACA GACGCGCCAA TCCCCTTCCG GCCCCAAAAT GGCGGGGACT ATACGCCCCG CCACGAGCTT AAACCGCATG TGGCCGTGGG CCAGACAGGG ATAATGGCGC ACGTTGCCGA TGGCGAAACA GCCCGGCGGC AGCAGCTGGA AACGGAGGAG GCGTTATGA
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Protein sequence | MSKRVLIIYA HPEPSSLTRQ LVDVSVECLT AQGHEVLQSD LYAMGWKAIF DEHDFPERAN PQRLSFGAES AHAYRYRRQS PDVAAEQDKV LAADAVIFQF PLWWYGMPAI MKGWIDRVWA AGLAHGYKGA GNTYRYGDGA FKGKRAMLSV AVGGPAEDYS PRGINGPLEQ LLFPITHGSL YFPGFDVLPT FAIYGTGNLT AADVMAAKEA WRARLADLFT DAPIPFRPQN GGDYTPRHEL KPHVAVGQTG IMAHVADGET ARRQQLETEE AL
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