Gene Pmen_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3155 
Symbol 
ID5106484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3497006 
End bp3498067 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content66% 
IMG OID640504411 
Productaldo/keto reductase 
Protein accessionYP_001188640 
Protein GI146308175 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.107134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA AGACATTAGG CAATACCGGG CTACTGGTCT CGCAGCTCTG CCTGGGCACC 
ATGACCTTCA GCGATGGCAG CGGCATCTAC GAGCACATCG GCGATGTCGG CCAGGCGGCG
GCCGACGAGT TAGTCAAGGC CAGCCTCGAT GCCGGTATCA ATTTCTTCGA CACGGCGGAT
GTCTACTCCG CCGGTGCCAG CGAGCGCACG CTCGGCCAGG CGCTGAAGAA TCTGGGTGTC
ACGCGCAGCG ATGTGGTGCT GGCGACCAAG GTCTACAGCC GCATGGGCCA GGGGCGCAAC
GATGTCGGCG CGTCTCGTGG GCATATCATG GATGCGGTCG AGGCCAGCCT GCGGCGACTG
CAGACCGATC ATATCGACCT CTATCAGATT CACGCCCACG ACAGCGTGAC GCCGCTGGAG
GAAACCCTGC GCGCGCTGGA CGATCTGGTG CGCCAGGGCA AGGTGCGTTA CGTCGGTGTG
TCGAACTGGC AGGCCTGGCG CGTCGCCACG GCGCTGGGCG TTTCAGCGCG GCTGAACCTG
GAGCGCTTCA ATACGTTGCA GGCCTACTAC TCGGTCGCCG GTCGCGATCT GGAGCGCGAA
CTCATCCCGA TGCTCGAGGC CGAGAAAATG GGCCTGCTGG TCTGGAGCCC GCTGGCCGGC
GGCCTGCTAT CGGGCAAGTT CAGCCGCGAG AACCAATCGC CGGAAGGGTC GCGTCGCTCC
TCGTTCGACT TCCCCATCGT CGACAAGGCG CGCGCCTGGG ACGTGATCGA CGTGCTGCGG
CCCATAGCCG AGGCCCATGG TTGCAGCCCG GCCCGTATCG CCCTGGCCTG GCTGCTGGCC
AAGCCCGCCG TCACCTCAAT CATCGTCGGC GCGAAACGAC TCGGCCAGCT CCAGGACAAT
ATCGCCGCCG TGGACATCAC CCTGAGCGAG GAGGAGATCG CCCGGCTCGA TGCCGTCAGC
GAGCTGCCGC CCGAGTACCC CGGCTGGATG ATGGCGACGC AAGGGGTCGA CCGCCTGGGG
CCCGTGGATC TGTGGGCCGA CAAGCTGGCT CAGACCTCCT GA
 
Protein sequence
MKYKTLGNTG LLVSQLCLGT MTFSDGSGIY EHIGDVGQAA ADELVKASLD AGINFFDTAD 
VYSAGASERT LGQALKNLGV TRSDVVLATK VYSRMGQGRN DVGASRGHIM DAVEASLRRL
QTDHIDLYQI HAHDSVTPLE ETLRALDDLV RQGKVRYVGV SNWQAWRVAT ALGVSARLNL
ERFNTLQAYY SVAGRDLERE LIPMLEAEKM GLLVWSPLAG GLLSGKFSRE NQSPEGSRRS
SFDFPIVDKA RAWDVIDVLR PIAEAHGCSP ARIALAWLLA KPAVTSIIVG AKRLGQLQDN
IAAVDITLSE EEIARLDAVS ELPPEYPGWM MATQGVDRLG PVDLWADKLA QTS