Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3132 |
Symbol | malE |
ID | 5107454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3463872 |
End bp | 3465059 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640504388 |
Product | maltose ABC transporter periplasmic protein |
Protein accession | YP_001188617 |
Protein GI | 146308152 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0559599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0111617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA CGCTGCTCAG CGCAGTCGCC ATCGGCCTTG CCGCCACCCT GAGCCATTCC CTGCCGGCCC AGGCCGCCAT CGAGGAAGGC AAGCTGGTCA TCTGGATCAA CGGCGACAAG GGCTACAAGG GCCTGGCCAA GGTCGGCGAG CGCTTCACCG CCGACACCGG TATCGCCGTG GAGGTGGCCC ACCCGGACAG CGCCACCGAC AAATTCCAGC AGGCCGCCGC CACCGGCAAC GGCCCGGACA TCTTCATCTG GGCCCACGAC CGCCTCGGCG AATGGGCGCA GAGCGGGTTG ATCTCGCCGA TCACCCCCAG TGCCAAGACC CAGGGCGAGA TCGAGGATTT CGCCTGGGAC GCAGTGACCT ACGGCGGCAA GCTGTGGGGC TACCCGATGG CGGTGGAGTC CATCGGCCTG CTCTACAACA AGGCCCTGGT GCCGACGCCG CCGGCCACCT TCGATGAGGT GCTGAAGCTC AACGCCGAGC TGGCCAAGTC CGGCAAGCGC GCCATCCTCT GGGATTACAA CAACACCTAC TTCACCTGGC CGCTGCTGGC CGCCAACGGC GGCTACGTGT TCGCCGACAA CGACGGCGGC TATGACACCA GCCGCACCGG GGTCAACAGC GACGGCGCCA AGCAGGGCGC GCAGACCCTC AAGGCGCTGA TCGACGCCGG GGTGATGCCC AAGGGCGCCG ACTACAGCGT CGCCGAGGCA GCCTTCAACA AGGGCGAGTC GGCCATGTTC ATCAGCGGCC CCTGGGCCTG GGCCAACGCC AAGAAGAGCG GCATCGATTT CGGCGTGGCG CCGATCCCCG CCGTGGGCGA TGCCCCCAGC CGACCCTTCA GCGGGGTGAT GGCCGCCGCG CTGAACGCCG CCAGCCCCAA CCAGGCGCTG GCCGTGGAGT TCCTCGAGAA CTACCTGCTG CAGGTCGAAG GCCTCAAGAC CGTGAGCGCC GACGTGCCGC TCGGCGCCGT GCCGAACAAG GCCTACATGG CCGAACTGGC CAGCGATCCG CTGATCAAGG CCACCTTCGA CAACGCCCAG CTCGGCCGGC CGATGCCCAA CGTGCCGGAA ATGGGCGCCT TCTGGTCGGC CATGGCGCCG GCGCTGACCA ACATCACCTC CGGTCGCCAG ACCGTGGACG CCGCGCTGGA CGACGCTGCC AAGCGCATCG CCAAGTGA
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Protein sequence | MNKTLLSAVA IGLAATLSHS LPAQAAIEEG KLVIWINGDK GYKGLAKVGE RFTADTGIAV EVAHPDSATD KFQQAAATGN GPDIFIWAHD RLGEWAQSGL ISPITPSAKT QGEIEDFAWD AVTYGGKLWG YPMAVESIGL LYNKALVPTP PATFDEVLKL NAELAKSGKR AILWDYNNTY FTWPLLAANG GYVFADNDGG YDTSRTGVNS DGAKQGAQTL KALIDAGVMP KGADYSVAEA AFNKGESAMF ISGPWAWANA KKSGIDFGVA PIPAVGDAPS RPFSGVMAAA LNAASPNQAL AVEFLENYLL QVEGLKTVSA DVPLGAVPNK AYMAELASDP LIKATFDNAQ LGRPMPNVPE MGAFWSAMAP ALTNITSGRQ TVDAALDDAA KRIAK
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