| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3098 |
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| Symbol | |
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| ID | 5107421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3425060 |
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| End bp | 3426421 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504355 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001188584 |
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| Protein GI | 146308119 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.905617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAC TCTCCACTTT CGCCAAGCGC GTGCGCCAAC TCTGGCACGG GGCAGATCTG
GCCCTGGTAG GCCAGCGCCG GGAACGGCGC ATGCGCATGC TGGCCAGCCT GGTCATGGTG
GTGATCGGGC TGCTCTGGGG GCTGTTCTTC TCGCTCAATG GCTACTGGGC CATCGTGGTG
ATGGACGGGG TGATCATCCT CAGTGGGCTG GCCGTCTTCG CGCTGACCCT GCGCGGTCGG
GGGCGCAGCG CCAACCTGAT CCTGTTCGGT GCTCTGATCC TGGTCGTGGT CGCCTCCGCG
CTTCTGCTCG ACCCGCCCAC GCTCGCGGCG CCACGGGCCA GCCACCTGTA TCTGCTGCCG
ATGGCGGTGG GCGCGCTGAT GGCCTTTCGC GACGATCCGC TATGGCTGCG TTACGGCGTT
GCGCTGCTCT GCCTGCTGCT GTTCGTCGGG CTGGCGGCAT CCGTCTGGCG CCCCACCGAT
GCCCATGCCC TGCCGGACGA GGTGCGCGTG GTAGGCTCGT GGGTGCAGGG CGGCGTCGCC
ATGGTGCTGT TCTTCGTGCT GCTGCACATC CTGCAGACCG ATACGGCCGA ACGCTCGGAA
CTGGACAGCG ACCTGCGCGC GGCGCTGCGC GAGCGGCAGT TCGTGCTCTA TTACCAGCCG
CAGCTCAACG CGGCCAACCG GGTGATCGGG GCCGAGCTGC TGATTCGCTG GCAGCACCCG
CAGCGCGGCC TGGTGGGGCC TGGCGAATTC ATCGACTACG CCGAGAACAC CGGGTTGATC
ATTCCCCTCG GCCAGTGGGT GCTGGAGCAG ACGGCAGCGC AGCTGCGGCA CTGGAGCGAC
GAGCCGCTGT TTCGCGACAT CGGCCTGGCG GTGAACATCA GCCAGAAGCA GTTTCGCCAG
CCCGGTTTCG TGGCCGAGAT CCTCGCGTTG ATCGAGCGCC ACGGCATCGC TGCCCAGCGT
CTCGAGTTGG AGCTGACCGA GACCCTGATC GTGCACGACA TGGAAGACCT CACCCGCAAG
ATGAACGCGC TGGTGGAGCA CGGCGTGCGT TTCTCGCTGG ACGACTTCGG CACCGGCTTT
TCCTCCCTCA GCCACCTCAA GCGGCTGCCG CTGAGCAAGC TGAAGATCGA CCGCTCCTTC
ATCTGCGACG TGCTCACCGA TGCCAACAGC GAAACCATCG TGCGCACCGT GATCGCCCTT
GGCCAGAGCA TGGGCATGAC GGTGATCGCC GAAGGGGTGG AAACCGAGGC GCAGCGGCGC
TTTTTGGCCG ACAACGGCTG CAGTCAGTTC CAGGGCTACC TGCTCGGTCG ACCGATGCCG
CTGGCGGATT TCTGCGCCTT CGTGCAGCGC CATAACGCCT GA
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| Protein sequence | MPALSTFAKR VRQLWHGADL ALVGQRRERR MRMLASLVMV VIGLLWGLFF SLNGYWAIVV
MDGVIILSGL AVFALTLRGR GRSANLILFG ALILVVVASA LLLDPPTLAA PRASHLYLLP
MAVGALMAFR DDPLWLRYGV ALLCLLLFVG LAASVWRPTD AHALPDEVRV VGSWVQGGVA
MVLFFVLLHI LQTDTAERSE LDSDLRAALR ERQFVLYYQP QLNAANRVIG AELLIRWQHP
QRGLVGPGEF IDYAENTGLI IPLGQWVLEQ TAAQLRHWSD EPLFRDIGLA VNISQKQFRQ
PGFVAEILAL IERHGIAAQR LELELTETLI VHDMEDLTRK MNALVEHGVR FSLDDFGTGF
SSLSHLKRLP LSKLKIDRSF ICDVLTDANS ETIVRTVIAL GQSMGMTVIA EGVETEAQRR
FLADNGCSQF QGYLLGRPMP LADFCAFVQR HNA
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