Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3054 |
Symbol | |
ID | 5107534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3380426 |
End bp | 3381208 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640504311 |
Product | methionine aminopeptidase |
Protein accession | YP_001188540 |
Protein GI | 146308075 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.020093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTCA CCATCAAATC CCCCGAAGAA ATCGAGAAAA TGCGCGTCGC CGGTCGCCTG GCCGCCGAAG TGCTGGAGAT GATCGGCGAG CACGTCAAGC CTGGCGTCAC TACCGACGAG CTGGACCGCA TCTGTCACGA CTACATCGTC AACGTGCAGA AAGCCATTCC CGCGCCGCTC AACTACAAGG GCTTCCCCAA GTCGATCTGC ACCTCGATCA ACCATGTGGT GTGTCACGGC ATCCCCAACG ACAAGCCGTT GAAAGAGGGC GACGTGCTGA ACATCGACGT CACCGTGATC AAGGATGGCT ACCACGGCGA CACCAGCAAG ATGTTCATGG TCGGCAAGGT GGCGGAGTGG GCCGAGCGTC TGGCCAGGAT CACCCAGGAG TGCATGTATA AAGGTATCGA GCTGGTCAAA CCGGGCACGC GCCTGGGCGA TATCGGCGAG GTGATCCAGA AACACGCCGA GAAGAACGGT TTTTCCGTGG TGCGCGAATA CTGCGGCCAC GGCATCGGCG CCGTGTTCCA TGAAGAGCCG CAGGTGCTGC ACTACGGCAA GGCCGGTACC GGCATGGAAC TCAAGGAAGG CATGACCTTC ACCATCGAGC CGATGATCAA TCAGGGTCGC CCGGAAACCC GTCTGCTCGG TGATGGCTGG ACCGCCATCA CCAAGGACCG CAAGCTGTCG GCGCAGTGGG AGCACACCGT GCTGGTCACC GCCAACGGCT ACGAGATCCT GACCCTGCGC AGCGACGATA CCCTGCCGCG CACCTCGGCC TGA
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Protein sequence | MSVTIKSPEE IEKMRVAGRL AAEVLEMIGE HVKPGVTTDE LDRICHDYIV NVQKAIPAPL NYKGFPKSIC TSINHVVCHG IPNDKPLKEG DVLNIDVTVI KDGYHGDTSK MFMVGKVAEW AERLARITQE CMYKGIELVK PGTRLGDIGE VIQKHAEKNG FSVVREYCGH GIGAVFHEEP QVLHYGKAGT GMELKEGMTF TIEPMINQGR PETRLLGDGW TAITKDRKLS AQWEHTVLVT ANGYEILTLR SDDTLPRTSA
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