| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3023 |
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| Symbol | pcm |
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| ID | 5107503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3347678 |
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| End bp | 3348352 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504280 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_001188509 |
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| Protein GI | 146308044 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000027014 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTGGCC AGGACGATAT GCAGCGCCGC GGGATCGGCA TGACCTCGCA GCGCACCCGT
GAGCGATTGA TTCAGCGTCT TTACGAAGAG GGGCTGTCCA ACGCGCGGGT GCTTGAGGTG
ATTCGGCGCA CGCCGCGCCA TCTGTTCGTC GACGAGGCGC TGGCGCACCG TGCCTACGAG
GACACGGCGC TGCCCATCGG GCACAACCAG ACCATTTCCC AGCCTTATAT GGTCGGCCGC
ATGACCGAGC TGCTGCTGGC TGCCGGCCCG CTGGACAAGG TGCTGGAGAT CGGCACCGGT
TCCGGCTACC AGACCGCCGT GCTGGCGCAA CTGGTGGAGC GGGTGTTCTC GGTCGAGCGG
ATCCAGGTGC TGCAGGACCG TGCCAAGGAG CGTCTGGCCG AACTCAGCCT GCGCAACGTG
GTCTTCCGCT GGGGTGATGG CTGGGAAGGT TGGAATGCGC TGGGGCCATA CAACGGCATC
ATCGTCACTG CGGCGGCGGC GCAGGTTCCG CAGGCGCTGC TCGACCAACT GGCGCCCGGT
GGCCGTCTGG TCATCCCGGT CGGCGCGGGA GATGTGCAGC AACTGCTGCT GATCGTGCGC
GAAGAGCATG GTTTTTCTCG CCATGTGCTG GATGCGGTGC GTTTCGTCCC CTTACTCAAC
GGGCCGCTGG CCTGA
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| Protein sequence | MRGQDDMQRR GIGMTSQRTR ERLIQRLYEE GLSNARVLEV IRRTPRHLFV DEALAHRAYE
DTALPIGHNQ TISQPYMVGR MTELLLAAGP LDKVLEIGTG SGYQTAVLAQ LVERVFSVER
IQVLQDRAKE RLAELSLRNV VFRWGDGWEG WNALGPYNGI IVTAAAAQVP QALLDQLAPG
GRLVIPVGAG DVQQLLLIVR EEHGFSRHVL DAVRFVPLLN GPLA
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