Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2996 |
Symbol | |
ID | 5107477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3318156 |
End bp | 3319214 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640504254 |
Product | phosphoribosylaminoimidazole synthetase |
Protein accession | YP_001188483 |
Protein GI | 146308018 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.55909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.000666575 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAAGC AACCCTCCAT CAGCTACAAG GACGCAGGCG TCGACATCGA TGCCGGCGAG GCCCTGGTCG AACGCATCAA AGGCGTGGCC AAGCGCACTG CCCGTCCTGA GGTCATGGGT GGCCTGGGCG GCTTCGGCGC CCTCTGCGAG ATCCCGGCCG GCTACAAGCA GCCGGTGCTG GTGTCCGGCA CCGACGGCGT CGGCACCAAG CTGCGCCTGG CGCTGAACCT GAACAAGCAC GACAGCATCG GCCAGGATCT GGTCGCCATG TGCGTCAACG ACCTGGTGGT CTGCGGCGCC GAGCCGCTGT TCTTCCTCGA CTACTACGCC ACCGGCAAGC TCAACGTCGA CGTGGCCGCC ACCGTGGTCA CCGGCATCGG CGCCGGCTGC GAGCTGGCTG GCTGCTCCCT GGTCGGTGGC GAAACCGCCG AGATGCCGGG CATGTACGAA GGCGAAGACT ACGACCTGGC CGGCTTCTGC GTCGGCGTGG TGGAGAAGAG CGAGATTATC GACGGCTCCA AAGTCGCCAC CGGCGACGCG CTGATCGCCC TGCCCTCCTC CGGTCCGCAC TCCAACGGCT ATTCGCTGAT CCGCAAGATC ATCGAAGTCT CCGGTGCCGA CATCGAACAG GTACAACTCG ACGGCAAGGC CCTGGCTGAT CTGCTGATGG CGCCGACGCG CATCTACGTC AAGCCGCTGC TCAAGCTGAT CAAGGACACC GGCGCGGTCA AGGCCATGGC CCACATCACT GGCGGCGGTC TGCTGGACAA CATCCCGCGC GTACTGCCGC AAGGCGCCCA GGCGGTGATC GACGTGGCCA GCTGGAATCG TCCGGCGGTG TTCGACTGGC TGCAGGAGAA AGGCAACGTC GACGAGCATG AGATGCATCG CGTGCTCAAC TGCGGCGTGG GCATGGTCAT CTGCGTCGCC CAGGATCAGG TCGAAGCAGC GCTGGCCAGC CTGCGCGCCA GCGGCGAGTC GCCCTGGGTC ATCGGCCAGA TCGCCGAAGC GGCAGAAGGC GCCGCCCAGG TTCAGCTGAA CAACCTGAAA ACCCACTGA
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Protein sequence | MSKQPSISYK DAGVDIDAGE ALVERIKGVA KRTARPEVMG GLGGFGALCE IPAGYKQPVL VSGTDGVGTK LRLALNLNKH DSIGQDLVAM CVNDLVVCGA EPLFFLDYYA TGKLNVDVAA TVVTGIGAGC ELAGCSLVGG ETAEMPGMYE GEDYDLAGFC VGVVEKSEII DGSKVATGDA LIALPSSGPH SNGYSLIRKI IEVSGADIEQ VQLDGKALAD LLMAPTRIYV KPLLKLIKDT GAVKAMAHIT GGGLLDNIPR VLPQGAQAVI DVASWNRPAV FDWLQEKGNV DEHEMHRVLN CGVGMVICVA QDQVEAALAS LRASGESPWV IGQIAEAAEG AAQVQLNNLK TH
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