| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2971 |
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| Symbol | |
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| ID | 5107689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3295796 |
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| End bp | 3296935 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504229 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001188458 |
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| Protein GI | 146307993 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.134618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA ACCATTTCGA CACCGAGCAC AATCTGTTCC GCGACGCTTT CGCGGCCTTT
CTGGACAAGG AGGTGGTGCC GCATCAGGAG GAGTGGGAGG CGGCGGGCGT GGTCGATCGC
AGCGTGTGGG CCAAGGCTGG CGAGATGGGT TTTCTGCTGC CCTGGGCGGA CGAGGAGTAC
GGCGGCGCCG GGCTCAAGGA TTTTCGCTAC GAGCAGATCA TGTGCGAGGA GCTGGCGCGG
ATCAACGAGC CGGGCTTCAT GGTTCCCCTG CACTCGGCGC TGTGCGGGCC CTATATCGCC
GAGTACGGCA GTGCGGAGCA GAAGACGCGC TGGCTGCCCG GCATCATCCG TGGCGAGACC
ATTCTCGCCG TGGCCATGAC CGAGCCGTCG GCCGGTTCCG ACCTGGCCGG CATGCGCACC
ACGGCGGTGG ACAAGGGCGA CCACTGGCTG CTCAACGGCT CCAAGGTGTT CATCTCCAAC
GGCTACCTGG CCGATCTGGT GATAGTCGCG GCCAAGACCG ACCCGGCCAA CAAGCACGCC
ATGGGCCTGT TTCTGGTGGA GCGCGGCATG GCGGGTTTCG AGCGTGGCAA GAAACTGAAG
AAGCTCGGCA TGCACAGCCA GGACACCGCC GAGCTGTTCT TCAACGACGT CAAGGTGCCC
AAGGAGAACC TCCTGGGCGA CGCCAAGGGC GGCTTCTTCT ACCTGATGAA CATGCTCGCC
CAGGAGCGCC TGACCAATGC CTGCGGCGCG GTGGCCGGTG CCGAGGCGGC CCTGCAGACC
ACCATCGACT ATGTCAGGGA GCGCCAGGCC TTCGGTCGCC CGGTGGCGCA CTTTCAGAAT
ACCCGCTTCA AGCTGGCCGA GATGCGCACG CAGATCGATG TGGCACAGGT CTTCACCGAC
CGCTGCGTGC TGGATCACAA CCAGAAGAAG CTCACCCCGG AAGTCGCCGC AGAGGCCAAA
CTGTTCACCA CCGAGCTGCT GTGCAAGGTG GTCGATGAGG GCGTGCAGCT GCATGGCGGC
TGGGGCTACA TGTGGGAATA CCCGATCTGC AAGATGTACG CGAACGCGCG TATCCAGCGC
ATCTTCGCCG GCACCTCGGA AATCATGAAG GAGATCATCA GCCGCGGTAT GAAGCTGTAA
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| Protein sequence | MQRNHFDTEH NLFRDAFAAF LDKEVVPHQE EWEAAGVVDR SVWAKAGEMG FLLPWADEEY
GGAGLKDFRY EQIMCEELAR INEPGFMVPL HSALCGPYIA EYGSAEQKTR WLPGIIRGET
ILAVAMTEPS AGSDLAGMRT TAVDKGDHWL LNGSKVFISN GYLADLVIVA AKTDPANKHA
MGLFLVERGM AGFERGKKLK KLGMHSQDTA ELFFNDVKVP KENLLGDAKG GFFYLMNMLA
QERLTNACGA VAGAEAALQT TIDYVRERQA FGRPVAHFQN TRFKLAEMRT QIDVAQVFTD
RCVLDHNQKK LTPEVAAEAK LFTTELLCKV VDEGVQLHGG WGYMWEYPIC KMYANARIQR
IFAGTSEIMK EIISRGMKL
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