| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2933 |
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| Symbol | |
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| ID | 5107651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3247686 |
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| End bp | 3249452 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640504188 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001188420 |
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| Protein GI | 146307955 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC TCTGGCCGGA CTGGCTGCGC CCGCTATGGC TGGCGCTGGT GCCCCTGCTG
GCCTGGCTGC TCTGGCGGCT GTGGCACCGC AAGCGGCAGA GCGGGCGCTG GCAGCTGCTG
CTGCCGGAAG CCTTTCACCA GACCCTGCTC AAGGGCGGTA GCGGCCGCAC CAGCAAGCTG
CCCTGGCTCG CCCTCGGTCT GGCCTGGGCA CTGGCGCTGC TGGCCCTGCT CGGCCCCAGC
TGGCAGCGCG TCGAGCAGAG CAACCAGAAG CCGGCCGACC CGCTGCTGGT GCTGCTGGAG
CTGACCCCGC AGATGCTCGC CACCGACGGC CCGCCCAATC GTCTGGAGCA GGCGCGGCGC
AAGCTGCTCG ACCTGCTCGA AGCCCGGCGC GACGCGCAGA CCGCGATCAT CGTCTATGCC
GGCAGCGCCC ATGGTCTGGT GCCGCTGTCC GACGACCTGG CCACCAGCAG CAACCTGCTC
GAAGCGCTCA AGCCGTCCCT GATGCCCGAA CCGGGCCGCC GCGCCGATCT GGCCGTGGTC
CGCGCCCTGC AACTGCTGGA TCAGGCGCAG CTGGGTCAGG GACGTCTGCT GCTGATCACC
AGCGCGCTGG ACGAGCAGGA GCGCAGCGGC ATCCGCCAGG CACTGGAGAA ACGCACCGTG
CCGCTGCTCA TCCTCGGTGT CGGCAGCCGC GAAGGCGCGC CGGTGGTGCA GGAAGACGGC
AGCTTTCTCA AGGACGAGCG CGGCGCCATC CTGATTCCCC GCCTCGATGC CCGCGGCCTG
CGTGAGACCG CCGAGGCGCA TGCCGGGCGC TACGCATCGA TGCGCCTGGA TGACGAGGAC
CTGCGCCGCC TCGGCCTGCT CGACAGCCCG CAGGCGCTGC GTGCCGCGGG AGAGCCGACC
CAGCTCGATG CCCAGATCGA TCAGGGCTAT TGGTTGCTCC TGCCGCTGCT GTTGCTGGCC
GCCCTTGCCG GGCGCCGTGG CTGGCTGTTC TGCCTGCCGC TGCTGCTGAT GTTGCCGCCG
CAGGCCAGCC ACGCGTTCAG CTTCGACGAT CTCTGGCTGC GCCCGGACCA GCAGGGCCAG
CGCCTGCTCG AAGCGCAGCG CCCCGCCGAG GCGGCGCAGC GTTTCCACGA CCGCCAATGG
CAGGGCAAGG CACTGTACGA GGCCGGCGAT TACGCCGCCG CGGCCGAGCG CTTCGCCCAG
GGCGACAGCG CCGCGGATCA CTACAACCGC GGCAACGCGC TGGCCAAGGC CGGCGAACTG
GAGGCGGCGC TGGACGCCTT CGAGCAGGCG CTGGAACGTC AGCCCGACCT GAGCGCCGCA
CAGCACAACA AGGCCCTGGT CGAAGAGGCG CTGCGCCAAC GCGAACAGCA GCAGAGCTCG
GCCGACAGCG ACCAGGCGCA GCAGGCGGAA CAGGACGGCG AATCCGACGC GGCCAACGAA
TCTCCAGCCA GCCAGGGCAA CGAGCCCCAG CCCGGCCAAC CGGCGCAGCC GAGCAAACCA
GGTGAGTCGG CGGGCGGTGA CGAAGCGCAA AGCGCCGATA ACGGCAACGA CAGCGCCGCG
CAAGCGTTGC CCCAGACCGG CGAGCCGCAG CCGGCGAACG ACAGCGAGGT GCTCGAACGC
CCACGCGGCG AAGCCGACCT GGGCAACGCC GACGAACGTC GCCAGGCTCT GGAACAATGG
CTGCGGCAGA TCCCGGACGA TCCGGGCGAG CTGCTGCGGC GCAAATTCTG GTACGAACAG
CAACAGCGTC AGGACCCAAA TCGATGA
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| Protein sequence | MSLLWPDWLR PLWLALVPLL AWLLWRLWHR KRQSGRWQLL LPEAFHQTLL KGGSGRTSKL
PWLALGLAWA LALLALLGPS WQRVEQSNQK PADPLLVLLE LTPQMLATDG PPNRLEQARR
KLLDLLEARR DAQTAIIVYA GSAHGLVPLS DDLATSSNLL EALKPSLMPE PGRRADLAVV
RALQLLDQAQ LGQGRLLLIT SALDEQERSG IRQALEKRTV PLLILGVGSR EGAPVVQEDG
SFLKDERGAI LIPRLDARGL RETAEAHAGR YASMRLDDED LRRLGLLDSP QALRAAGEPT
QLDAQIDQGY WLLLPLLLLA ALAGRRGWLF CLPLLLMLPP QASHAFSFDD LWLRPDQQGQ
RLLEAQRPAE AAQRFHDRQW QGKALYEAGD YAAAAERFAQ GDSAADHYNR GNALAKAGEL
EAALDAFEQA LERQPDLSAA QHNKALVEEA LRQREQQQSS ADSDQAQQAE QDGESDAANE
SPASQGNEPQ PGQPAQPSKP GESAGGDEAQ SADNGNDSAA QALPQTGEPQ PANDSEVLER
PRGEADLGNA DERRQALEQW LRQIPDDPGE LLRRKFWYEQ QQRQDPNR
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