Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2901 |
Symbol | |
ID | 5107277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3210012 |
End bp | 3210197 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640504156 |
Product | carbon storage regulator |
Protein accession | YP_001188388 |
Protein GI | 146307923 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.748507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATTC TGACTCGCCG GGTCGGAGAG ACCCTGATGG TCGGTGATGA TGTGACTGTC ACCGTGTTGG GCGTGAAAGG TAACCAGGTG CGTATTGGTG TCAATGCGCC GAAAGAGGTT GCCGTACACC GTGAAGAAAT CTACCAGCGC ATCCAGAAAG AGAAGGGTGA CGAACCAAGC CACTAA
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Protein sequence | MLILTRRVGE TLMVGDDVTV TVLGVKGNQV RIGVNAPKEV AVHREEIYQR IQKEKGDEPS H
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