Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2880 |
Symbol | |
ID | 5107795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3190951 |
End bp | 3192096 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640504131 |
Product | phosphonate metabolism protein PhnM |
Protein accession | YP_001188367 |
Protein GI | 146307902 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCTG AACAGATTCT CAGCAACGCC CGTATCGTCA CCGCCGAGCG TGAGTTCCTC GGCACCCTGT TGCTGCGCGA CGGGCTGATC GCCGCAGTGG ACGAGGGCGC CAGTCGCCTG CCGCAGGCCC AGGACCTGGG CGGCGATTAC CTGCTGCCGG GGTTGGTGGA GCTGCACACC GACAACCTGG AAAAACACAT GAGCCCGCGC CCTGGCGTGG ATTGGCCGTC GACCTCGGCG GTGCTGACCC ACGATGCGCA GATCGTCGCC GCCGGCATCA CCACGGTGTT CGATGCGCTG TCCATCGGTG ACATCAACCC GCGTGGCCGG CGCATGCAGC AACTGCCCGT GATGATCGAG GCCATTGCCG CCAGCGAGGC GGCGGGGCAG ACCCGCGCCG AGCACCGCCT GCACCTGCGC TGCGAGCTGT GCCACCCCGA TGCTCTGACC ATCTACCGCG ACCTGGTGGA GCATCCCTTG GTGGCGCTGG TGTCGGTGAT GGATCACTCA CCCGGCCAGC GCCAGTTCGC CAAGGTGGAG AAGTACCGCG AGTACTACAT GGGCAAGTAC CACCTGAGCC CGGCGGAGAT GGAGGAGTTT CTTCAGGAAC AGATCGCCAA CTCGCGCCAG TACAGCGACC GCCAGCGTCG CGCCATCGTC GAGGACTGCC ACAGTCGGGG TATCTCGGTG GCCAGCCATG ACGACGCGAC CCTGGCCCAC GTGCAGGAGT CGGCCGGCTT CGGCATGGCC ATCGCCGAGT TCCCCACCAC CCTGGAAGCG GCCAGGGCCA GCCACGAGCT GGGGCTGAAG GTGCTGATGG GCGCGCCGAA CCTGGTGCGC GGCGGCTCGC ACTCGGGCAA TATCGCCGCC GCGGAGCTGG CGCGTCACGG CGTGCTGGAT ATCCTCTCCA GCGACTACTA CCCGGCCAGC CTGCTGCATG CGGCCTGGCT GCTCGCCGGG CAGGACAACG ACTATGATTT GCCTGCGGCC ATCGCCACCG TAAGCCGCGC GCCGGCCAGG GCGGCCGGGC TGGATGACCG CGGCGAGATC CGCGTCGGCC TGCGCGCCGA CCTGGTACAG GCCAGGGCGC ATGGCCAGCA ACCGGTGATC CAGCAGGTGT GGCGCCAAGC ACGAAGGGTA TTCTGA
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Protein sequence | MSSEQILSNA RIVTAEREFL GTLLLRDGLI AAVDEGASRL PQAQDLGGDY LLPGLVELHT DNLEKHMSPR PGVDWPSTSA VLTHDAQIVA AGITTVFDAL SIGDINPRGR RMQQLPVMIE AIAASEAAGQ TRAEHRLHLR CELCHPDALT IYRDLVEHPL VALVSVMDHS PGQRQFAKVE KYREYYMGKY HLSPAEMEEF LQEQIANSRQ YSDRQRRAIV EDCHSRGISV ASHDDATLAH VQESAGFGMA IAEFPTTLEA ARASHELGLK VLMGAPNLVR GGSHSGNIAA AELARHGVLD ILSSDYYPAS LLHAAWLLAG QDNDYDLPAA IATVSRAPAR AAGLDDRGEI RVGLRADLVQ ARAHGQQPVI QQVWRQARRV F
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