| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2876 |
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| Symbol | |
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| ID | 5107791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3185326 |
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| End bp | 3188793 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504127 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001188363 |
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| Protein GI | 146307898 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.66593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTGG CCGAGATCCG CCTGGATGAC AAGTACCGTC TCGCCACCGG TCACCTCTAC
CTGACCGGCA CCCAGGCGCT GACCCGCCTG CCCATGCTGC AGAAACAGCG TGACGCCGCC
CATGGTCTGA ACACTGCCTG CTTCATTTCC GGTTACCGCG GCTCGCCGCT GGGCAACCTG
GACAAGAGCC TGTGGGACGC CAAGCAGTAC CTCAAGGACA ACCACATCCA CTTCCAGCCC
GGGGTCAACG AAGAGCTGGC CGCCACCGCC TGCTGGGGTA GTCAGCAGAC CAGCCTGTTC
CCCGGCGCGC GCTACGACGG CGTGTTCGCC ATGTGGTACG GCAAGGGCCC GGGTGTGGAT
CGCTGCGGCG ACGTGTTCAA GCACGGCAAC TCGGCCGGCG TATCGCCGCA TGGCGGCGTG
CTGCTGCTGG CCGGCGACGA CCATGGCTGC AAGTCCTCGA GCATCGCCCA CCAGAGCGAG
CACGCCTTTA TCGCTGCCTC GATCCCGGTG CTGAACCCGG CCAACGTTCA GGAGATCCTC
GACTACGGCA TCATCGGCTG GGAACTGTCG CGCTACAGCG GTTGCTGGGT GGCGCTGAAG
ACCATCGCCG AGAACGTCGA TTCCTCGGCC GTGGTGGATG TCGACCCGCT GCGGGTCGAG
GTGAAGATTC CCACCGACTT CAAGCTGCCG GAAGACGGCG TGCATATCCG CTGGCCGGAC
CCGCCCCTGG TCCAGGAAAA GCGCCTCAAC ACCTACAAGA TCTACGCCGC GCGTGCCTTC
GCCCTGGCCA ACAACCTCAA CCAGATCAAG CTCGATTCGC CCAACCCGCG CCTGGGTATC
ATCACCACTG GCAAGTCCTA CCTGGATGTA CGTCAGGCGC TCAACGACCT CGGTCTGGAC
GAGCAGCTCT GTGCCCAGGT CGGCCTGCGC GTGCTCAAGG TCGGCATGAG CTGGCCGCTG
GAGCCGGTGT CGGTGCACGA GTTCGCCGAG GGCTTGGACG AGATCCTGGT GGTGGAGGAA
AAGCGCAGCA TCATCGAGGA CCAGCTGACC GGGCAGCTGT ACAACTGGCC GGTGGGCAAG
CGCCCGCGAG TGGTGGGTGA GTTCGATGAG GACGGCAATT CGCTGCTGCC GAACCTCTCC
GAGCTGACCC CGGCGATGAT CGCCCGGGTG ATCGCCAAGC GCCTGGCGCC GATCTATTCC
AGCCCGGTGA TCGAAGAGCG CTTGGCCTTC CTCGCCGCCA AGGAGGCGGC GCTGGCTGCG
CCCAAGCACC ACACCGCGCG CACCCCGCAT TTCTGCTCCG GCTGCCCGCA CAACAGCTCG
ACCAAGCTGC CGGAAGGCAG CCGCGCTCTG GGCGGCATCG GTTGCCACTA CATGACCCAG
TGGATGGACC GCAACACCGA CACCTTCACC CAGATGGGCG GCGAGGGTGC TACCTGGATC
GGCCAGGCGC CGTTCACCGA CACCCCGCAT GTGTTCCAGA ACCTCGGCGA CGGCACCTAT
TTCCATTCCG GCCAGCTGGC CCTGCGCGCC TCGGTCGCCG CCGGGGTCAA CATCACCTAC
AAGATTCTCT ACAACGACGC GGTGGCCATG ACCGGCGGCC AGCCCATCGA CGGCGAGCTG
CGCATCGACC AGCTCAGCCA GCAGGTCTAT GCCGAGGGGG TCAAGCGCAT CGCCCTGGTC
AGCGACGAGC CGGACAAGTA CCCGACCCGC GCCACCTTCG CGCCCATCGT CACCTTCCAC
CATCGCCGCG AGCTGGACGC CGTGCAGCGT GAGCTGCGCG AGTTCAAGGG CGTGTCGGTG
ATCCTCTACG ATCAGACCTG CGCCACCGAG AAGCGCCGCC GGCGCAAGCG CGGCAAGCTG
GTCGACCCGG CCAAGCGCGT CTTCATCAAC CCGGCGGTGT GCGAGGGCTG CGGCGACTGC
AGCGTCAAGT CCAACTGCCT GTCGGTGCTG CCGCTGGAGA CCGAGCTGGG GCGCAAGCGC
GAGATCGACC AGAACGCCTG CAACAAGGAT TTCAGCTGTC TGGAAGGCTT CTGCCCGAGC
TTCGTCACCG TGCATGGCGG CAGTCTGCGC AAGCCCGAGG CGGTTGGCCT GGGCGCGCTC
TTCATCGCCC TGCCGGAGCC GCGCCAGCCT GCGCTGGAGC GGCCATGGAA CATCCTCCTG
CCCGGCGTCG GCGGCAGTGG CGTGACCACG GTCGGCGCGC TGCTGGGCAT GGCCGCACAT
ATCGAAGGCA AGGGCTGCAC GGTGCTGGAT CAGGCCGGCC TGGCGCAGAA GTTCGGCCCG
GTGGTCACCC ATATCCGCAT CGCCGCCAAA CAGGACGATA TCTACGCAGT GCGCATCGCC
GCCGGCGAGA CCGATCTGCT GCTCGGTTGC GACCTGGTGG TGGCCGCCAG CGAAGAGGCC
CTGGCCAAGC TCAACGACAA GATTGCCCAT GCGCTGGTCA ACAGCCACGA GGCGGCCACC
GCCGAGTTCA CCCGCAACCC CGATGCCCAG GTGCCCGGCG CCGCCATGCG CGAGGCCATC
GTCGAGGCGG TCGGCGCGGC CAAGACCCAG TTCGTCGATG CCACCCGCCT GGCCACCCGC
CTGCTGGGCG ACAGCATCGC CACCAACCTG TTTATGCTCG GCTACGCCTA TCAGAAGGGT
CTGGTGCCGG TATCGGCCGA AGCCATCAAC AAGGCCATCG AACTCAATGG CGTGGCGGTG
CAGCTCAATC AGCAGGCCTT CCTCTGGGGC CGTCGCGCGG CCCACGACCT GGCCGCGGTG
GAGAAGCTGG CCGCGCCCAA GGTGGTCGAG GCGCCGCGTT GCCAGAGCCT GGAGGAGATC
GTCGAGGATC GTGCGCAGCG TCTGAGTGCC TACCAGAACG CCGCCTACGC CGCGCGCTAC
CGCGAGCTGG TCGAGCGCGT GCGCCAGGCC GACACTGATG CCGAGCAGCG CCTGAGCAAG
GCGGTGGCGC GCTACTACTT CAAGCTCCTG GCCTACAAGG ACGAGTATGA GGTGGCGCGC
CTGTACAGCG ACGCCGCCTT CCGCAAGCAG CTCGAGGCCC AGTTCGAAGG CGACTACCAG
CTGCAGTTCC ACCTGGCGCC GAGCTGGCTG AGCAAGCCCG ATCCGGTCAC CGGTCAGCCG
CGCAAGCGCG CCTTCGGTCC CTGGATGCTC AAGGCCTTCG CCGTGCTGGC GCGCTTCAAG
TTCCTGCGCG GCACGGTGCT CGATCCGTTT GGCCACAGTG CCGAGCGCAA ACTCGAACGC
GAGCTGATCG AGGAGTACGA GGCGACCGTC GCCTATCTGC TCGCCGAGCT CGATGCCGGC
AACTACCGCA CGGCGGTGGC CCTGGCCGAG ATTCCCGAGC AGATCCGCGG CTACGGCCAC
GTCAAGGAAG CGGCGCTGGC CAAGGCACGC GAGCAGGCCG CGCAGCTCAA GGCGCGCATG
GCCGTCAGCG AGATCGCCGC GGTGCAGCTG TTCGAACCGG CCGCCTGA
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| Protein sequence | MSLAEIRLDD KYRLATGHLY LTGTQALTRL PMLQKQRDAA HGLNTACFIS GYRGSPLGNL
DKSLWDAKQY LKDNHIHFQP GVNEELAATA CWGSQQTSLF PGARYDGVFA MWYGKGPGVD
RCGDVFKHGN SAGVSPHGGV LLLAGDDHGC KSSSIAHQSE HAFIAASIPV LNPANVQEIL
DYGIIGWELS RYSGCWVALK TIAENVDSSA VVDVDPLRVE VKIPTDFKLP EDGVHIRWPD
PPLVQEKRLN TYKIYAARAF ALANNLNQIK LDSPNPRLGI ITTGKSYLDV RQALNDLGLD
EQLCAQVGLR VLKVGMSWPL EPVSVHEFAE GLDEILVVEE KRSIIEDQLT GQLYNWPVGK
RPRVVGEFDE DGNSLLPNLS ELTPAMIARV IAKRLAPIYS SPVIEERLAF LAAKEAALAA
PKHHTARTPH FCSGCPHNSS TKLPEGSRAL GGIGCHYMTQ WMDRNTDTFT QMGGEGATWI
GQAPFTDTPH VFQNLGDGTY FHSGQLALRA SVAAGVNITY KILYNDAVAM TGGQPIDGEL
RIDQLSQQVY AEGVKRIALV SDEPDKYPTR ATFAPIVTFH HRRELDAVQR ELREFKGVSV
ILYDQTCATE KRRRRKRGKL VDPAKRVFIN PAVCEGCGDC SVKSNCLSVL PLETELGRKR
EIDQNACNKD FSCLEGFCPS FVTVHGGSLR KPEAVGLGAL FIALPEPRQP ALERPWNILL
PGVGGSGVTT VGALLGMAAH IEGKGCTVLD QAGLAQKFGP VVTHIRIAAK QDDIYAVRIA
AGETDLLLGC DLVVAASEEA LAKLNDKIAH ALVNSHEAAT AEFTRNPDAQ VPGAAMREAI
VEAVGAAKTQ FVDATRLATR LLGDSIATNL FMLGYAYQKG LVPVSAEAIN KAIELNGVAV
QLNQQAFLWG RRAAHDLAAV EKLAAPKVVE APRCQSLEEI VEDRAQRLSA YQNAAYAARY
RELVERVRQA DTDAEQRLSK AVARYYFKLL AYKDEYEVAR LYSDAAFRKQ LEAQFEGDYQ
LQFHLAPSWL SKPDPVTGQP RKRAFGPWML KAFAVLARFK FLRGTVLDPF GHSAERKLER
ELIEEYEATV AYLLAELDAG NYRTAVALAE IPEQIRGYGH VKEAALAKAR EQAAQLKARM
AVSEIAAVQL FEPAA
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