Gene Pmen_2852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2852 
Symbol 
ID5107767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3133995 
End bp3134927 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content59% 
IMG OID640504102 
Productputative CheW protein 
Protein accessionYP_001188339 
Protein GI146307874 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.141391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGT TGATGGATTC GGTTAACCAG CGCACCCAGC TGGTGGGACA GAACCGCTTG 
GAGTTGCTGC TATTTCGCCT GGAAGGCCCA CAGCTTTACG GCATCAACGT ATTCAAGGTG
AAGGAGGTGC TGCAGTGCCC CAACCTCACC ATCATGCCGA AATCCAGTCC GGTGGTACGC
GGCGTGGCCA ATATCCGTGG CGGCACCATT CCGATTCTCG ATCTGTCCAT CGCCACCGGG
CGGGCGGCGC TGGAGGACCT CAAGACCAGC TTCGTCATCA TCACTGAGTA CAACACCAAG
GTTCAGGGCT TTCTGGTGCG TTCCGTGGAG CGCATCGTCA ACATGAATTG GGAAGAGATC
CATCCGCCAC CCAAGGGCAC CGGCCGTGAT CACTACCTGA CTGCGGTGAC GCGGCTCGAT
CAGCAACTGG TCGAGATCAT CGACGTGGAG AAGATCCTTG CCGAGGTGGC GCCCACCTCC
GAGGTGATCT CCGCCGGTGT GATCGACGAC CAGGTGCAGA GCCAGGCGGT GACCAAGCAT
GTGCTGATCG TCGACGACTC GTCGGTGGCA CGTAAGCAGG TGTCGCGTTG TCTGCAGACT
GTGGGGGTGG AAGTCACTGC ATTGAACGAC GGTCGTGAAG CGCTCAACTA CCTCAAGAAG
ATGGCCGATG AAGGGCGCGA CCCCGACAAG GAACTGCTCA TGCTGATTTC CGACATCGAA
ATGCCGGAAA TGGATGGCTA CACCCTGACT ACGGAGATTC GCAGCGATTC GCGCATGCAG
AAGCTGCATA TCCTCCTGCA TACTTCGCTC TCGGGGGTAT TCAACCAGGC GATGGTGAAG
AAGGTCGGTG CCGATGACTT TCTCGCCAAG TTCAAGCCGG ATGACTTGGC GGCGCGCGTG
GTTGATCGCA TTCGTGTGGT GGATGGGGGC TGA
 
Protein sequence
MAGLMDSVNQ RTQLVGQNRL ELLLFRLEGP QLYGINVFKV KEVLQCPNLT IMPKSSPVVR 
GVANIRGGTI PILDLSIATG RAALEDLKTS FVIITEYNTK VQGFLVRSVE RIVNMNWEEI
HPPPKGTGRD HYLTAVTRLD QQLVEIIDVE KILAEVAPTS EVISAGVIDD QVQSQAVTKH
VLIVDDSSVA RKQVSRCLQT VGVEVTALND GREALNYLKK MADEGRDPDK ELLMLISDIE
MPEMDGYTLT TEIRSDSRMQ KLHILLHTSL SGVFNQAMVK KVGADDFLAK FKPDDLAARV
VDRIRVVDGG