| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2833 |
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| Symbol | |
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| ID | 5107748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3109790 |
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| End bp | 3111253 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640504083 |
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| Product | flagellar hook-associated 2 domain-containing protein |
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| Protein accession | YP_001188320 |
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| Protein GI | 146307855 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.140245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00782764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTAGGTA TCACGGGAAT CGGTTCGGGA GTCGACATCG ACAGCATTGT AAAAGTGCTG
GTCGATTCCG AGCGAGCGCC GAAAACCGCT CAGCTCGATC GTCTCGAGAA AACAACCGTT
GCCCGTATCT CGGCGTTGGG CACCCTGACT GGCGCGCTCA ACACGTTCAA GACGGCGATC
GACTCGCTGA ACAAGGCGTC GTTGTTCGAA GCCCGCACGG CGAGTTCATC CAACACCAAC
GTGCTCAAGG TGACTGCCGC TACCACCGCG CCGGCGGGTA ACTACAGTGT GCAGGTGCAG
CAACTGGCCA GTAGCAGCAA GGTGGGTTTG CAATCGGTCA GTGGTGGCGG TGCGGCAACG
TTCAATAGCG GCGTCATGTC CATTTCCGCT GGCAGCACGA GCTTCGATGT TGAGATCACG
GAAGGGAACA ACACCTTGGC GGGTATGCGC GATGCGATCA ACGAGGCGGG CCGCAGCAGT
GGCGTGAGTG CCAGCATCAT CACCGACGAC TCCGGCTCGC GCTTGGTACT GACTTCCACC
AAAACCGGTG CAGGCAACGA TATCCAGGTG TCGGTGACGG AAGACGGCGT AACTTCCGGA
AGTAATGCGC TCACCTCCCA GGCCTTCACA CCTGCGGTCG ATCCCGACAA TGCCAACGCA
TTCCTGCCTC CCAGTTCCAC TACCGGTGCG GCCGGGGTGA TCAGCAAGGC CCAGTCGGCC
AAGTTGACCA TCGACGGATT GCAATTGGTG CGTGACACCA ACAAGATCGA TGATGCGCTT
GAAGGTGTCA CCCTCGATCT CGTCGCGGCG CAGTCCTCGG CGGATCGGCT TGAAGGCAAG
ACCATCAACC TGACCGTGGG CGTCGACAAG GCGGGTGTAA AGAGCAACCT GCAGAAGTTC
GTCAGTGCCT ACAACGCCCT TATCACCTCG ACTTCCCAGC TGACGGCAGT CGTACCGGTC
GATGGTTCGA ATCCGGTTAC CGGTCCTCTT CTGGGTGACT CCTCGGTGCG CAACGTGCTT
TCGGCGCTGC GCAACGAAAT GGTGAAGATG ACGGGTGAGG GCGGGGTGCG CGCGCTTGCC
GATCTGGGTA TCACCACCGA GAAGGATGGC AAGCTCACGC TCAACGACAG CGCGCTCACG
GCGACGCTGG ACAACAACTT CGACCAGGTC GCCGGTTACC TGACCGGAGG CGACGGCCTG
ATGGAGCGCC TGGCTAAAGC GGTGTCCGGC TACGTCTCCA CTGACGGCGT GCTGAAGCAG
CGTACCGATG CGCTCAACGG CACCAAGAAG AATATCGATG AGCAGCGCAA GGCCCTGGAT
CTGCGAGTGG AAAAGATCCA GACGCGCCTT TACGCCCAGT ACAACGCCAT GGACTCTCTG
GTCGGTCAGC TCAAGCGCAC AAGCGAAAGC CTGAGCGGCA TGCTGGCCAA CCTGCCCGGC
TTCGTCAGAA AGGATAGTAA GTGA
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| Protein sequence | MVGITGIGSG VDIDSIVKVL VDSERAPKTA QLDRLEKTTV ARISALGTLT GALNTFKTAI
DSLNKASLFE ARTASSSNTN VLKVTAATTA PAGNYSVQVQ QLASSSKVGL QSVSGGGAAT
FNSGVMSISA GSTSFDVEIT EGNNTLAGMR DAINEAGRSS GVSASIITDD SGSRLVLTST
KTGAGNDIQV SVTEDGVTSG SNALTSQAFT PAVDPDNANA FLPPSSTTGA AGVISKAQSA
KLTIDGLQLV RDTNKIDDAL EGVTLDLVAA QSSADRLEGK TINLTVGVDK AGVKSNLQKF
VSAYNALITS TSQLTAVVPV DGSNPVTGPL LGDSSVRNVL SALRNEMVKM TGEGGVRALA
DLGITTEKDG KLTLNDSALT ATLDNNFDQV AGYLTGGDGL MERLAKAVSG YVSTDGVLKQ
RTDALNGTKK NIDEQRKALD LRVEKIQTRL YAQYNAMDSL VGQLKRTSES LSGMLANLPG
FVRKDSK
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