Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2811 |
Symbol | fliQ |
ID | 5107607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3090385 |
End bp | 3090654 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640504061 |
Product | flagellar biosynthesis protein FliQ |
Protein accession | YP_001188298 |
Protein GI | 146307833 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.369637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0394695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCCG AGGTAGCGGT AGACCTGTTT CGCGAAGCGC TGTGGCTGAT CGTGCTGATC GTCGGCCTGG CGGTGGTGCC GAGTCTGCTG GTCGGTCTGG TGGTCGCCAT GTTCCAGGCC GCGACGCAGA TCAACGAACA GACCCTGAGC TTTCTGCCGC GTCTGATGGT GATGCTGATC ACCCTGATCT GGGCCGGCCC CTGGCTGGTG AGTCAGTTGA TGGAGTACAC GCAGAATCTG ATCCAGAACA TTCCGTACCT CATAGGTTGA
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Protein sequence | MTPEVAVDLF REALWLIVLI VGLAVVPSLL VGLVVAMFQA ATQINEQTLS FLPRLMVMLI TLIWAGPWLV SQLMEYTQNL IQNIPYLIG
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