Gene Pmen_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2798 
Symbol 
ID5107594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3076113 
End bp3076901 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID640504048 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_001188285 
Protein GI146307820 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.519748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.161878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT GGGCAGTAGC CAATCAGAAA GGTGGTGTCG GCAAGACCAC CACCTCCATC 
GCGCTGGCAG GCCTGTTGGC CGATGCCGGC AAGCGCGTGG TCGTGGTCGA CCTCGACCCC
CACGGGTCGA TGACCAGTTA CTTCGGCCAT GATCCCGATA CGCTGGAGCA CAGCTGCTTC
GATCTGTTCC TGCATCAGGG CAACGTGCCG CAGGGGCTGC CCCGGCAGCT GCTGCACAGC
ACCAGCCACG AGAACATCTC CTTGCTGCCG TCGAGCACCG CACTGGCCAC GCTGGAGCGT
CAGTCGCCGG GGCAGAGCGG CCTGGGGCTG GTGATCGCCA AGAGCCTGGC GCAGCTGTGG
GAGGATTTCG ATCACGCCAT CATCGACAGC CCGCCACTGC TCGGCGTGCT GATGGTCAAC
GCGCTGGCGG CCAGCCAGCA GCTGGTGATT CCGGTGCAGA CCGAGTTCCT GGCGGTGAAG
GGTCTGGAGC GCATGATCAC CACGCTGGCC ATGATCAACC GCTCGCGCAA GCAGGCGCTG
CCCTACACCA TAGTGCCGAC CCTGTTTGAT CGTCGTACCC AGGCGTCCAT GAGTACCCTG
CGCGTGCTGC GCAATACCTA TCCCGATCAT CTCTGGCCGG CCTACATTCC GGTCGACACC
CGTTTGCGCG ATGCCAGCCG GGCAGGGCGC ACGCCTTCGC AGTTCGATGC CGGCAGCCGC
GGCGTGATCG CCTACCGGGC GCTGCTCAAG CACCTGCTGA GCCACCAGCC GGCAGCGCAG
GTGGCTTGA
 
Protein sequence
MKVWAVANQK GGVGKTTTSI ALAGLLADAG KRVVVVDLDP HGSMTSYFGH DPDTLEHSCF 
DLFLHQGNVP QGLPRQLLHS TSHENISLLP SSTALATLER QSPGQSGLGL VIAKSLAQLW
EDFDHAIIDS PPLLGVLMVN ALAASQQLVI PVQTEFLAVK GLERMITTLA MINRSRKQAL
PYTIVPTLFD RRTQASMSTL RVLRNTYPDH LWPAYIPVDT RLRDASRAGR TPSQFDAGSR
GVIAYRALLK HLLSHQPAAQ VA