| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2736 |
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| Symbol | |
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| ID | 5107887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3003298 |
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| End bp | 3004851 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503986 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001188223 |
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| Protein GI | 146307758 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.545703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGTG ATGCGCTGAT CCGCCCCACG GCGGAACCCA GCCGCCGCGA CTGGATTGCG
GTGATGAGCG CGATGCTCGG CGCCTTCATG GCGGTGCTGG ATATCCAGAT CACCAACTCG
TCGCTCAAGG ACATCCAGGG TGCGCTGTCC GCCACGCTGG AAGAGGGTTC GTGGATTTCC
ACCTCCTACC TGGTGGCCGA GATCATCATG ATCCCGCTGA CCGCCTGGCT GGTGCAGCTG
CTCTCGGCGC GGCGCCTGGC GGTGTGGGTG TCGGTGGGCT TTCTGATCGC CTCGCTGCTG
TGCTCCCTGG CCTGGAGCCT GGAGAGCATG ATCGTGTTCC GCGCCCTGCA GGGCTTCACC
GGCGGCGCGC TGATCCCGCT GGCGTTCACC ATGACGCTGA TCAAGCTACC CGAGCACCAC
CGCGCCAAGG GCATGGCCCT GTTCGCCATC ACCGCCACCT TCGCCCCCTC CATAGGCCCG
ACGCTCGGCG GCTGGCTGAC GGAGAACTGG GGCTGGGAAT ACATCTTCTA CATCAACGTG
CCGCCCGGCC TGATCATGAT CGCCGGGCTG CTTTACGGCC TGGAGAAGAA GGCGCCGCAC
TGGGAGCTGC TGAAGACCAC CGACTACGCC GGCATCATCA CCCTCGGCCT GGGCCTGGGC
TGCCTGCAGG TATTTCTCGA GGAAGGCCAT CGCAAGGACT GGCTGGAGTC GCACCTGATC
GTCGGCCTCG GCAGCGTGGC GCTGATCAGC CTGATCCTGT TCGTCATCCT GCAGCTCTCG
CGGCCCAACC CGCTGATCAA CCTGGGCGTA CTGCGCGAGC GCAATTTCGG CCTGGCCAGT
ATTTCCAGCC TGGGGCTCGG TGTCGGTCTG TACGGCTCGA TCTATGTGCT GCCGCTGTAC
CTGGCGCAGA TCCAGGGCTA CAACGCCATG CAGATCGGTG AAGTGATCAT GTGGATGGGT
GTGCCGCAGC TGTTCCTGAT TCCGCTGGTG CCCAAGCTGA TGAAGGTCAT CTCGCCGAAA
TGGCTGTGCG CCCTGGGTTT CGCCCTGTTC GGCGCGGCGA GCTTCTTCTC CGGCGTGCTC
AACCCGGACT TCGCCGGCGA GCAGTTCCAG CACATCCAGA TCATCCGCGC ACTTGGCCAG
CCGCTGGTGA TGGTGACAGT ATCGCTGATC GCCACCGCCT ACATCCTGCC GCAGGATGCC
GGCTCGGCGT CCAGCCTGTT CAACATCCTG CGCAACCTGG GTGGCGCCAT CGGCATCGCC
CTGCTCGCCA CCCTCCTCGA TGCTCGCGCC AAGGTCTATT TCGACTACCT GCGCGAATCC
ATCGTGCCGA CCAACCCGCA GGTCGAGGAG CGGCTGCAGC TGCTGACGCA GACATTGGGC
AGCGAACAGG CAGCGCTGGC CAGGCTCAGC CAGATCGTCC ACGAGCAGGC GACCATCATG
GCCTACAACG ATGCCTTCCA CTTCATCGGC ATCGCCCTGG GCGTGAGCAT GCTGGCGATC
CTGCTGACGC GAAAGCTGCC GCAGAACATG GCCGGTGGTA GCGCGGCGCA TTGA
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| Protein sequence | MAGDALIRPT AEPSRRDWIA VMSAMLGAFM AVLDIQITNS SLKDIQGALS ATLEEGSWIS
TSYLVAEIIM IPLTAWLVQL LSARRLAVWV SVGFLIASLL CSLAWSLESM IVFRALQGFT
GGALIPLAFT MTLIKLPEHH RAKGMALFAI TATFAPSIGP TLGGWLTENW GWEYIFYINV
PPGLIMIAGL LYGLEKKAPH WELLKTTDYA GIITLGLGLG CLQVFLEEGH RKDWLESHLI
VGLGSVALIS LILFVILQLS RPNPLINLGV LRERNFGLAS ISSLGLGVGL YGSIYVLPLY
LAQIQGYNAM QIGEVIMWMG VPQLFLIPLV PKLMKVISPK WLCALGFALF GAASFFSGVL
NPDFAGEQFQ HIQIIRALGQ PLVMVTVSLI ATAYILPQDA GSASSLFNIL RNLGGAIGIA
LLATLLDARA KVYFDYLRES IVPTNPQVEE RLQLLTQTLG SEQAALARLS QIVHEQATIM
AYNDAFHFIG IALGVSMLAI LLTRKLPQNM AGGSAAH
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