| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2721 |
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| Symbol | |
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| ID | 5107872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2985886 |
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| End bp | 2986968 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503965 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001188208 |
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| Protein GI | 146307743 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0190941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0566777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC AGATTCTGGT TCTCCCTGGC GACGGTATCG GCCCGGAAAT CATGGCCGAA
GCGGTCAAGG TGCTGAACCT GGCCAACGAC AAGTACGCCC TGGGTTTCGA ACTGAGCTTC
GATGACCTGG GCGGCGCCGC CATCGACCGC TACGGCGTGC CGCTGGCCGA CGAGACCCTG
GCGCGCGCCA AGGCCGCCGA TGCCGTGCTG CTCGGCGCCG TTGGCGGGCC GAAGTGGGAC
ACCATCGATC CGGCCATCCG TCCGGAGCGC GGCCTGCTGA AGATCCGTTC GCAACTGGGC
CTGTTCGGCA ACCTGCGTCC GGCCATCCTC TATCCGCAAC TGGCCGAGGC CTCCAGCCTC
AAGCCTGAGG TTGTGGCGGG GTTGGATATC CTCATCGTGC GTGAGCTGAC CGGCGGCATC
TACTTCGGCC AGCCGCGCGA GAGCAAGGTG CTGGAAAACG GCGAGCGCAT GGCCTACGAC
ACCCTGCCGT ACAGCGAGAG CGAAATCCGT CGCATTGCCA AGGTCGGTTT CGACATGGCC
CGCGTGCGCG GCAAGAAGCT GTGCTCGGTG GACAAGGCCA ACGTCCTGGC CTCCAGCCAG
CTGTGGCGCA CGGTGGTCGA GGAAGCGGCC AAGGACTATC CGGACGTCGA GCTGAGCCAC
ATGTACGTCG ACAACGCTGC CATGCAACTG GTGCGCGCAC CCAAGCAGTT CGACGTGATC
GTCACCGACA ACATGTTTGG TGACATTTTG TCCGACGAGG CTTCGATGCT CACCGGCTCC
ATCGGCATGC TGCCGTCGGC TTCCCTGGAT GCCAACAACA AGGGCATGTA CGAGCCGTGC
CACGGCTCCG CGCCGGATAT CGCCGGCAAG GGCATCGCCA ACCCGCTGGC CACCATTCTC
TCGGTGTCCA TGATGCTGCG TTACAGCTTC GGCCAGGTGG CCGCGGCCGA TGCCATCGAA
AAAGCGGTGA GCCTGGTGCT GGATCGGGGC CTGCGTACCG GCGACATCTG GTCCGAGGGC
AAGACCAAGG TCGGTACCGC TGCGATGGGT GATGCAGTAG TCGAAGCGCT GCGTAGTCTG
TAA
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| Protein sequence | MSKQILVLPG DGIGPEIMAE AVKVLNLAND KYALGFELSF DDLGGAAIDR YGVPLADETL
ARAKAADAVL LGAVGGPKWD TIDPAIRPER GLLKIRSQLG LFGNLRPAIL YPQLAEASSL
KPEVVAGLDI LIVRELTGGI YFGQPRESKV LENGERMAYD TLPYSESEIR RIAKVGFDMA
RVRGKKLCSV DKANVLASSQ LWRTVVEEAA KDYPDVELSH MYVDNAAMQL VRAPKQFDVI
VTDNMFGDIL SDEASMLTGS IGMLPSASLD ANNKGMYEPC HGSAPDIAGK GIANPLATIL
SVSMMLRYSF GQVAAADAIE KAVSLVLDRG LRTGDIWSEG KTKVGTAAMG DAVVEALRSL
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