| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2720 |
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| Symbol | |
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| ID | 5107871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2984716 |
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| End bp | 2985828 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503964 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_001188207 |
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| Protein GI | 146307742 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0630746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0525607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG TAGGTCTGAT CGGTTGGCGT GGCATGGTCG GTTCCGTGCT CATGCAGCGC
ATGCTGGAAG AGCGGGACTT CGACCTGATC GAGCCGGTGT TCTTCACCAC CTCCAATGTC
GGTGGCCAGG GTCCTGCCAT TGGCAAGGAC ATTGCCCCGC TGAAGGACGC CTACAGCATC
GAAGACCTGA AAGGCCTGGA CGTGATCCTG ACCTGCCAGG GCGGCGACTA CACCAACGAA
GTCTTCCCCA AGCTGCGCGA AGCCGGCTGG CAGGGCTACT GGATCGATGC CGCCTCGTCG
CTGCGCATGG ACGACGGTGC GGTGATCGTG CTCGACCCGG TCAACCGCAA GGTGATCGAC
CAGGCGCTGG ACGCCGGCAC CAAGAACTAC ATCGGCGGCA ACTGCACCGT CAGCCTGATG
CTGATGGCCC TCGGTGGTCT GTACGAAGCC GGTCTGGTCG AGTGGATGAG CGCCATGACC
TACCAGGCGG CCTCGGGTGC CGGTGCGCAG AACATGCGCG AGCTGATCAA GCAGATGGGC
GCGATCAACG GTGCCGTCGC CGATGAACTG GCCGATCCGG CTAGTGCCAT TCTCGACATC
GACCGCAAGG TGGCCGAAGC CATGCGCGGC GAGGCCTTCC CGGTGGACAA CTTCGGCGTG
CCGCTGGCCG GCAGTCTGAT CCCCTACATC GACAAGGAGC TGCCCAACGG GCAGAGCCGT
GAGGAGTGGA AGGCCCAGGC CGAAACCAAC AAGATCCTCG GCCGCTTCAA GAGCCCGATC
CCGGTCGATG GCATCTGCGT GCGCATCGGC GCCATGCGTT GCCACAGCCA GGCGCTGACC
ATCAAGCTGA ACAAGGATGT GCCGATGGCC GACATCGAAG GCCTGATCAG CCAGCACAAC
CCCTGGGTCA AGCTGGTGCC GAACCACCGC GAAGACTCCA TCCGTGACCT CGGCCCGACT
GCCGTTACCG GTACCCTGAG CGTGCCGGTC GGTCGCCTGC GCAAGCTCAA CATGGGCTCG
CAGTACCTCG GCGCCTTCAC CGTCGGTGAC CAACTGCTGT GGGGCGCCGC CGAGCCGCTG
CGCCGCATGC TGCGGATCCT GCTGGAGCGC TAA
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| Protein sequence | MKRVGLIGWR GMVGSVLMQR MLEERDFDLI EPVFFTTSNV GGQGPAIGKD IAPLKDAYSI
EDLKGLDVIL TCQGGDYTNE VFPKLREAGW QGYWIDAASS LRMDDGAVIV LDPVNRKVID
QALDAGTKNY IGGNCTVSLM LMALGGLYEA GLVEWMSAMT YQAASGAGAQ NMRELIKQMG
AINGAVADEL ADPASAILDI DRKVAEAMRG EAFPVDNFGV PLAGSLIPYI DKELPNGQSR
EEWKAQAETN KILGRFKSPI PVDGICVRIG AMRCHSQALT IKLNKDVPMA DIEGLISQHN
PWVKLVPNHR EDSIRDLGPT AVTGTLSVPV GRLRKLNMGS QYLGAFTVGD QLLWGAAEPL
RRMLRILLER
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