Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2716 |
Symbol | |
ID | 5107867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2979064 |
End bp | 2979717 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503960 |
Product | N-(5'-phosphoribosyl)anthranilate isomerase |
Protein accession | YP_001188203 |
Protein GI | 146307738 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0539711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGG GCGTGAACGT GACAGTCGTG CGCAGCAAGA TTTGCGGCAT CACTCGTATC GAGGATGCTC TGGCAGCGGT GGAGGCGGGG GCGGATGCCA TCGGCCTGGT GTTCTACGCG AAAAGTCCGC GAGCGATCAG CGTCGAGCAG GCGCTGGCGA TCATCCAGGC ATTACCGCCC TTCGTGACTA CGGTGGGTCT GTTCGTCGAC ATGCCGCGCG CCGAGCTGCA GCAGCTGTTG CAGCGGGTGC CGCTGGACCT GTTGCAGTTT CATGGTGACG AGTCGCCGGC AGACTGTGAG GGTCACGGTC GTCCCTACAT CAAGGCCTTG CGGGTGCGCC CTGGCGAGGA CGTCGCGGCG TCGATGGCGC CCTATGTCGG TGCGCGAGGG ATTCTTCTCG ATACCTTTGT CGAAGGGATT CCGGGTGGCA CCGGGGCGGT GTTCGACTGG TCGCTGGTGC CGCAGCGGGC GGGTAAGCCG ATCATCCTCG CCGGCGGCCT GGATGCCGGC AACGTCGCAG CTGCCATTGA CCAGGTCCGA CCTTATGCGG TGGACGTGAG CGGTGGCGTC GAGCTCAGCA AGGGCATAAA GGATGCAGAG AAGATTCGCG CGTTCGTGCG GGCGGTGCGT AGCGCCGGAT GTGACGACGC CTGA
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Protein sequence | MARGVNVTVV RSKICGITRI EDALAAVEAG ADAIGLVFYA KSPRAISVEQ ALAIIQALPP FVTTVGLFVD MPRAELQQLL QRVPLDLLQF HGDESPADCE GHGRPYIKAL RVRPGEDVAA SMAPYVGARG ILLDTFVEGI PGGTGAVFDW SLVPQRAGKP IILAGGLDAG NVAAAIDQVR PYAVDVSGGV ELSKGIKDAE KIRAFVRAVR SAGCDDA
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