| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2706 |
|---|
| Symbol | |
|---|
| ID | 5107857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2967765 |
|---|
| End bp | 2968694 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640503950 |
|---|
| Product | electron transfer flavoprotein, alpha subunit |
|---|
| Protein accession | YP_001188193 |
|---|
| Protein GI | 146307728 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.796213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.172174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCC TGGTTATCGC TGAACACACC AATGCCGCTC TGGCTGCCGC TACCCTGAAC
ACCGTTGCTG CTGCGCAGAA GATCGGTGGC GACATTCACG TTCTGGTAGC CGGTGCCAAT
GCTGGCGCTG CCGCCGAAGC CGCTGCCAAG ATCGCTGGCG TGGCCAAGGT TCTGCTGGCC
GACAACGCTG CCTATGCCAA CCAGCTGCCG GAGAACGTCG CGCCGCTGGT AGCCGAGCTG
GGCAAGGGCT ACAGCCACAT CCTGGCTGCC GCCACCAGCA ACGGCAAGAA CATCCTGCCG
CGCGTCGCCG CTGCCCTGGA CGTCGATCAG ATCTCCGAGA TCATCGCCGT CGAAAGCGCC
GACACCTTCA AGCGTCCGAT CTATGCCGGT AACGCCATCG CCACCGTGCA GTCCTCGGCT
GCCATCAAGG TGATCACCGT GCGTAGCACC GGTTTCGACG CCGCGGCTGC CGAAGGCGGC
AGCGCTGCCG TTGAAGCCGT TTCCGGCCCG GCCGATGCCG GCAAGTCCGC CTTCGTTGGC
GAAGAACTGG CCAAGTCCGA CCGTCCGGAA CTGACCGCTG CCAAGATCGT CGTTTCCGGC
GGCCGTGGCA TGGGCAATGG CGACAACTTC AAGCACCTGT ACGCCCTGGC GGACAAGCTG
GGCGCTGCCG TTGGCGCTTC CCGCGCTGCC GTCGACGCTG GCTTCGTACC GAACGACATG
CAGGTCGGTC AGACCGGCAA GATCGTTGCG CCGCAGCTGT ACATCGCCGT CGGTATCTCC
GGCGCGATCC AGCACCTGGC CGGTATGAAG GACTCCAAGG TGATCGTTGC GATCAACAAG
GACGAAGAGG CGCCGATCTT CCAGGTGGCC GACTACGGTC TGGTTGCCGA TCTGTTCGAA
GCCGTACCGG AGCTGGAAAA GCTGGTCTAA
|
|---|
| Protein sequence | MTILVIAEHT NAALAAATLN TVAAAQKIGG DIHVLVAGAN AGAAAEAAAK IAGVAKVLLA
DNAAYANQLP ENVAPLVAEL GKGYSHILAA ATSNGKNILP RVAAALDVDQ ISEIIAVESA
DTFKRPIYAG NAIATVQSSA AIKVITVRST GFDAAAAEGG SAAVEAVSGP ADAGKSAFVG
EELAKSDRPE LTAAKIVVSG GRGMGNGDNF KHLYALADKL GAAVGASRAA VDAGFVPNDM
QVGQTGKIVA PQLYIAVGIS GAIQHLAGMK DSKVIVAINK DEEAPIFQVA DYGLVADLFE
AVPELEKLV
|
|---|
| |