Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2647 |
Symbol | |
ID | 5107956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2902767 |
End bp | 2904845 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503890 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_001188134 |
Protein GI | 146307669 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.377545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTATC AGGTTCTTGC ACGTAAATGG CGTCCGCGCT CGTTCCGCGA AATGGTCGGC CAGACCCATG TGCTCAAAGC CTTGATCAAC GCCCTGGACA GCCAGCGACT GCACCACGCC TATCTATTCA CCGGTACCCG CGGTGTGGGC AAGACCACCA TCGCGCGGAT CATTGCCAAG TGCCTGAACT GCGAAACCGG CATCAGCTCC ACGCCCTGTG GCACCTGCTC GGTCTGTCGG GAAATCGATG AAGGGCGTTT CGTCGATCTG ATCGAAGTGG ACGCGGCCAG CCGCACCAAG GTCGAAGACA CCCGTGAGCT GCTCGACAAC GTGCAGTATT CGCCAAGTCG CGGCCGCTTC AAGGTCTACC TGATCGACGA AGTGCACATG CTCTCCACCA GCTCCTTCAA CGCCCTGTTG AAGACCCTGG AGGAGCCGCC GCCCCATGTG AAATTCCTCC TGGCCACCAC CGACCCGCAG AAGCTGCCGG TCACCGTGCT GTCGCGCTGC CTGCAGTTCT CCCTGAAGAA CATGCCGCCG GAGCGGGTGG TGGAGCACCT GAGCCACGTG CTGACCGCCG AGAACGTACC GTTCGAAGAC GATGCGCTGT GGCTGCTGGG GCGTGCCGCC GACGGCTCGA TGCGCGACGC CATGAGCCTG ACCGACCAGG CCATCGCCTT CGGCGAGGGC AAGGTGCTTG CTGCCGATGT GCGCGCGATG CTCGGTACGC TGGATCACGG CCAGGTCTAC GGTGTGCTGC ATGCGTTGTT CGAAGGTGAC GCGCGGGCGT TGATCGAGGC GGTACGCCAT CTGGCCGAGC AGGGCCCGGA CTGGAACGGC GTGCTGGCGG AGATGCTCAA CGTCCTGCAC CGCGTGGCCA TCGCCCAGGC GCTGCCGGAT GCCGTGGACA ACGGCCAGGG TGATCGCGAA CGCGTGCTGC AACTGGCCCA GGCGCTGCCG GCCGAGGACG TGCAGTTCTA CTACCAGATG GGCCTGATCG GCCGGCGCGA TCTGCCGCTG GCGCCGGATC CGCGTGGCGG CTTCGAGATG GTGCTGCTGC GCATGTTGGC CTTCCGTCCG GCCGATGCCG ACGATGCGCC AAGGATCACG CTAAAGCCCT TGGGGATCAG CCAGGCCACT GCTGATTCCC AACCGAATCC AGTGGCCGGC ACCGCTATGC CGGCTCCTGT GGTTTCTGCT CCCGCTGCTG CTGTGGTTTC GGCACCGTCT GCGCCCGTCT CTCCAGCAGT GGCCGAAGTC CGTCCGGTCA CGCCAGCTCC GAGCAGCGAG CCTGTCGTGA GTGAACCCGT CCCGCCTGTT GAGGCCCCGG TTGCGACCGC CCCCAGCCTG CCGCCCGAGC CAGAGCCAGA GCCCGAGATC GCTGCTCCTG CGGCTGCCGT CGATGTGCCC TGGGAGACCG CCAAGGCCGC GGAACCGGCA GTCGCAGCCG TTCAGCCTGT CGTTGCGCCA GAGCCTGTAG CGGTGGAGGT TGCAGCAGTT GCCGAGTCCG CTCCGAGCGA GGTCGTGCAG CCTGTGGTGG ATGCTGACGG CGGTGACGAC GAGCCACCGC CCGGCGATTA CGACTATGTC GAGATGGACG CGGAAACGCT CGACTACGAT TTCGGCCAAG CCGAGGCCGA GGCGCCAGCG GTTGCAGAGC CTTTGCCGGC CGCCAAACCG GCTACCGGCC TGGCGGCAGA ATGGCTGACC CTGTTCCCGC AGCTGGGGTT GGGTGGCATG ACCGGCAGCA TCGCCGCCAA CTGCACGCTG ATCGAAGCCA ATGGCGACGA CTGGCTGCTG CACCTGGATC CGGCGCACAG CGCGCTGTTC AATCCGACCC AGCAGCGCCG TCTCAACGAC GCGCTGAACC AGCTGCAGGG GCGCAGCATC AAATTGCGCA TCGAGCTGTG CAAGCCGGAG CAAGAGACGC CGGCGCAGGC CGCAGCCCGT CGCCGCGCCG AACGCCAGCG CAGCGCCGAG GCCTCGATCC ATGCCGACCC GCTGGTGCAG CAGATGATTC AACAGTTCGC CGCCAAGGTG CGCGACGACA GCATCGAACC TATCGATACC CCCAGCTAA
|
Protein sequence | MSYQVLARKW RPRSFREMVG QTHVLKALIN ALDSQRLHHA YLFTGTRGVG KTTIARIIAK CLNCETGISS TPCGTCSVCR EIDEGRFVDL IEVDAASRTK VEDTRELLDN VQYSPSRGRF KVYLIDEVHM LSTSSFNALL KTLEEPPPHV KFLLATTDPQ KLPVTVLSRC LQFSLKNMPP ERVVEHLSHV LTAENVPFED DALWLLGRAA DGSMRDAMSL TDQAIAFGEG KVLAADVRAM LGTLDHGQVY GVLHALFEGD ARALIEAVRH LAEQGPDWNG VLAEMLNVLH RVAIAQALPD AVDNGQGDRE RVLQLAQALP AEDVQFYYQM GLIGRRDLPL APDPRGGFEM VLLRMLAFRP ADADDAPRIT LKPLGISQAT ADSQPNPVAG TAMPAPVVSA PAAAVVSAPS APVSPAVAEV RPVTPAPSSE PVVSEPVPPV EAPVATAPSL PPEPEPEPEI AAPAAAVDVP WETAKAAEPA VAAVQPVVAP EPVAVEVAAV AESAPSEVVQ PVVDADGGDD EPPPGDYDYV EMDAETLDYD FGQAEAEAPA VAEPLPAAKP ATGLAAEWLT LFPQLGLGGM TGSIAANCTL IEANGDDWLL HLDPAHSALF NPTQQRRLND ALNQLQGRSI KLRIELCKPE QETPAQAAAR RRAERQRSAE ASIHADPLVQ QMIQQFAAKV RDDSIEPIDT PS
|
| |