| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2607 |
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| Symbol | |
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| ID | 5107917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2869066 |
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| End bp | 2870064 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503851 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_001188095 |
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| Protein GI | 146307630 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00078494 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.780558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGT TCTGGAGTTG GTACGTAACC ATTCTGTCTC TGGGCACCAT CTTCGCCCTG
ACCTGGCTGA TCTTCGGCAC CCGCAAGGGC CAGCGCCAGG AAACCACCGA GGAAACCGTC
GGCCACAGCT TCGACGGCAT CGAGGAGTAT GACAACCCGC TGCCGAAGTG GTGGTTCATG
CTGTTCGTCG CCACCATCGT GTTCGCTCTG GGTTACCTGG CCCTGTATCC GGGCCTGGGC
AACTTCAAGG GTCTGCTGCC GGGTTACGAC TACCTCGACA GCGAGAGCAA GACCCCCTTC
GCGGCTGGCG TGCAGGTTGC CGGTGGTGAA GTGCGTCATG CCGGCTGGAC CGGCGTGCAC
CAGTGGGAGA AGGAGATGCT GCGCGCCGAC GAGCAATACG GCCCGCTGTT CGCCAAGTAC
GCCGCGATGT CGATCGAAGA AGTCGCGCAG GACCCGCAAG CCCTGAAAAT GGGCGGTCGC
CTGTTCGCCT CCAACTGCTC GGTGTGCCAC GGCTCCGACG CCAAGGGCAG CTACGGCTTC
CCCAACCTGA CCGACAGCGA ATGGCGTTGG GGCGGCGAGC CGGAAACCAT CAAGACCACC
ATCCTCAAGG GTCGCCAGGG CGCCATGCCG GCTCAAGGCC CGGCCATCGG CGAAGACGGC
GTGCGCAACG TAGCTGCCTA TGTGCTGAAG GAACTGGGCG GTCGCGAACT GCCGGAAGGC
GTGGAAGCCG ATATCGAAGC GGGCCAGAAG GTCTTCGCCG GTACCTGCTT CGCCTGCCAC
GGCGCCGACG GCAAGGGCAC CCCGGCCATG GGCGCACCGA ACCTGACCAA CCCGGCAGCG
TTCATCTACG GCAGCAGCTA CGCGCAACTG CAGCAGAGCA TCCGCTACGG TCGTCACGGC
AACATGCCGG CCCAGGAAGA ATTCCTCGGC AACGACAAGG TGCACCTGCT GGCCGCCTAC
GTGTACAGCC TGTCGCACAA GGCACAAGAG CAGCAATAA
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| Protein sequence | MTTFWSWYVT ILSLGTIFAL TWLIFGTRKG QRQETTEETV GHSFDGIEEY DNPLPKWWFM
LFVATIVFAL GYLALYPGLG NFKGLLPGYD YLDSESKTPF AAGVQVAGGE VRHAGWTGVH
QWEKEMLRAD EQYGPLFAKY AAMSIEEVAQ DPQALKMGGR LFASNCSVCH GSDAKGSYGF
PNLTDSEWRW GGEPETIKTT ILKGRQGAMP AQGPAIGEDG VRNVAAYVLK ELGGRELPEG
VEADIEAGQK VFAGTCFACH GADGKGTPAM GAPNLTNPAA FIYGSSYAQL QQSIRYGRHG
NMPAQEEFLG NDKVHLLAAY VYSLSHKAQE QQ
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