| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2602 |
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| Symbol | |
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| ID | 5107912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2865546 |
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| End bp | 2866472 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503846 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_001188090 |
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| Protein GI | 146307625 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000191523 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.411563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCT TCTGGAGCTG GTACATCACC CTGCTGACCC TGGGTTCGCT GGTCGCGCTG
TTCTGGCTGA TCTTCGCCAC CCGCAAGAGC GAAGTGCACA AGAACCCGAC CGAGCAGACC
ATGGGGCACT CCTTCGATGG CATCGAGGAG TACGACAACC CGCTGCCGAA GTGGTGGTTC
ATGCTGTTCC TCGGCACCCT GGTGTTTTCC GTGGCCTATC TGCTGCTGTA CCCGGGCCTG
GGCAACTTCA AGGGCCTGCT GCCGGGTTAC GAGGACGGCT GGACCCAGGT CAACCAGTGG
CAGCGCGAGA TGAATCGTGC CGATGAGTTG TACGGGCCGA TCTTCGCCAA ATATGCGGCC
ATGCCCATCG AAGAAGTGGC CAAGAACGAG CAGGCGCTGA AAATGGGCGG TCGCCTGTTC
GCCTCCAACT GCTCGGTGTG CCATGGCTCC GACGCCAAGG GCAGCTATGG CTTCCCCAAC
CTGACCGACA GCAGCTGGCG CTGGGGCGGC GAGCCGGAAG CCATCAAGAC CACCATCCTC
AACGGCCGCA TGGGCATGAT GCCGGCGCAA GGCCCGGTGA TCGGCGAAGA TGGCGTGCGT
AACGTCGCTG CCTACGTGCT GCAGGAACTG GGCGGCCGCG AGCTGCCGGA AGGAACCCAG
GCGGATGTCG CGGCCGGCAA GCAGATCTTC GCCAGCACCT GCGCCGCCTG CCACACCCCG
GCCGGCACCG GCATGGCCGC CATGGGTGCG CCGGACCTCA CTCAACCGAG CGCCTTCATC
TACGGCAGCA GCTTTGCCCA ACTGCAACAG ACCATTCGCT ATGGTCGCAG CGGCAACATG
CCCGCCCAGG GTGATTTCCT CGGCAACGAC AAGGCCCACC TGCTGGCCGC CTACGTGCTC
AAGCTGAGCC AGGGCGACGC CAAGTAA
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| Protein sequence | MTTFWSWYIT LLTLGSLVAL FWLIFATRKS EVHKNPTEQT MGHSFDGIEE YDNPLPKWWF
MLFLGTLVFS VAYLLLYPGL GNFKGLLPGY EDGWTQVNQW QREMNRADEL YGPIFAKYAA
MPIEEVAKNE QALKMGGRLF ASNCSVCHGS DAKGSYGFPN LTDSSWRWGG EPEAIKTTIL
NGRMGMMPAQ GPVIGEDGVR NVAAYVLQEL GGRELPEGTQ ADVAAGKQIF ASTCAACHTP
AGTGMAAMGA PDLTQPSAFI YGSSFAQLQQ TIRYGRSGNM PAQGDFLGND KAHLLAAYVL
KLSQGDAK
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