Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2593 |
Symbol | |
ID | 5107903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2857602 |
End bp | 2858411 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503837 |
Product | hypothetical protein |
Protein accession | YP_001188081 |
Protein GI | 146307616 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.572119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.592044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAGCAC TGTTTCTTGC GCTGCTGGTC ATGAGCGCGA CGGCGCAGGC CGCGCAGCTC GAGGTGCAAC TGAGCGGCGG GCAACGCAGC TGGAGCAGCA GCGAATTGCT CGACCATCCG CAGGCACGCG ACATCGATAT AGACGAAGAC GTGAGCTACA AGCGGCCCAT GCGTTACCGC GCGGTGCCCA TAAGCACCCT GCTGGACGGC GTCAGCGCGG GCGACCACTT GCAGGCCGTG GCCCTGGACG GTTTTGCCGC CGAACTGCCG GCCGCCACCC TGCTGGCCCG CGAGGGTGCC AAGGCCTGGC TGGCCATCGA GGACCCGCAG CATCCGTGGC CACCGCTGGC CAAGGGCAAG CCCAGCGCCG GTCCCTTCTA TCTGGTCTGG ACCGATCCGG CCGCCAGCCA GATCGGCCCG GAGCAGTGGC CCTTCCAGGT CGCCCGGATT CGCCAGCTCG CCGCGGTCGA ACAGCGCTTC CCCGCCCTGC TGCCGGCAGC GGACGCCAGC GCCGAAGTCC GTACCGGCTT TGCCCTGTAT CAGAAGAACT GCATGGCCTG CCATCGCCTC AATGGCGCGG GTGACTCCGA GTTCGGCCCC GACCTGAACA TTCCGTACAA CCCGACCGAG TACTTCACCG GCGATTTCCT GCGCCAGTAC ATCCGCAACC CGCAGAGCCT GCGGCGCTGG CCGCAGGGGC GCATGCCGGG GTTCACCCCG CAGGTGCTGA GCGAACAGGA GCTGACCGAG CTGATCACCT ATCTGGCGCA CATGGCCGAT ATTCGGGATC AGCGCAGCGA ACGTCAGTAG
|
Protein sequence | MKALFLALLV MSATAQAAQL EVQLSGGQRS WSSSELLDHP QARDIDIDED VSYKRPMRYR AVPISTLLDG VSAGDHLQAV ALDGFAAELP AATLLAREGA KAWLAIEDPQ HPWPPLAKGK PSAGPFYLVW TDPAASQIGP EQWPFQVARI RQLAAVEQRF PALLPAADAS AEVRTGFALY QKNCMACHRL NGAGDSEFGP DLNIPYNPTE YFTGDFLRQY IRNPQSLRRW PQGRMPGFTP QVLSEQELTE LITYLAHMAD IRDQRSERQ
|
| |