Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2561 |
Symbol | greB |
ID | 5108028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2823752 |
End bp | 2824249 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503805 |
Product | transcription elongation factor GreB |
Protein accession | YP_001188049 |
Protein GI | 146307584 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.01679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000000000012211 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCGCT ACCGTCCTCC TCGCCCCGCC GGCACCCCGC TGATCACCCC CGAAGGCGAG GCGCGCCTGC GCGCCGAGCT GCACGAACTG TGGCACGTGC GCCGGCCGCA GGTGACCCAG TCCGTCAGCG AAGCCGCCGC CCAGGGCGAT CGCTCGGAGA ACGCCGAATA CACCTACGGC AAGAAGATGC TGCGCGAGAT CGACAGCCGC GTGCGCTTTC TCACCAAGCG TCTGGAAAAG CTCAAGGTAG TCAGCGACAG GCCCTCGGAC CCGAACAAGG TGTACTTCGG AGCCTGGGTC ACCATCGAGG ATGAAGACGG CGAACAGTCG CGCTATCGCA TCGTCGGCCC GGACGAGCTG GATCTGAAAC AGGGCCTGAT CAGCATCGAT TCGCCGCTGG CTCGCGCCCT GGTGGGCAAG CCGCTGGATG CCGAAGTGCG GGTGCACAGC CCGAGCGGTG AGAAGACCTG CTACATCGTC GAGATCGAGT ATCCCTGA
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Protein sequence | MSRYRPPRPA GTPLITPEGE ARLRAELHEL WHVRRPQVTQ SVSEAAAQGD RSENAEYTYG KKMLREIDSR VRFLTKRLEK LKVVSDRPSD PNKVYFGAWV TIEDEDGEQS RYRIVGPDEL DLKQGLISID SPLARALVGK PLDAEVRVHS PSGEKTCYIV EIEYP
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