| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2498 |
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| Symbol | |
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| ID | 5107374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2759735 |
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| End bp | 2761048 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503742 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001187986 |
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| Protein GI | 146307521 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.331302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.203368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGTT TGCAAGGCTC GGACCTCCTG GCCCTCGGCT TCATGACTTT TGCGCTGTTC
CTCGGCGCCG GCAACATCAT CTTCCCGCCC AGCGCGGGCC TGGCGGCGGG GGATAACCTG
CTGCCGGCGG CACTGGGCTT TCTCCTGACC GGAGTCGGCC TGCCGTTGCT GACGGTGGTC
GCCCTGGCTC GTGTCGGTGG CGGTATGGAT CTGCTCACCG CGCCGCTGGG CAAGATCGCC
GGCGCAACCC TGGCGGTGGC GGTGTACCTG GCCATCGGCC CGCTGTTCGC CACCCCGCGT
ACCGCCGTGG TGTCGTTCGA GATGGGCATT GCCCCGTTCA CCGGCAACGA AGGCGCGCCG
CTGCTGATCT ACACCCTGGT GTATTTCGCG GCCGTGCTCT TTCTCTCGCT CAACCCGGGA
CAGCTGGTCG ATCGCATCGG CAAGTTCATC ACCCCGGTAC TGCTGGCGGC GCTGCTGGTG
CTGGGCGGCG CGGCCTTGTT CGCACCGGCC GGCGAGATCG GCACGGTTGC CGAGAGCTAT
CGCGAGACGC CGCTGGTGCA AGGCTTCCTG CAGGGCTACC TGACCATGGA TACCCTGGGC
GCGCTGGTCT TCGGTATCGT CATCGCCAGT GCCATTCGTG ACCGCGGTGT CAGCGACGCC
GGCCTGGTGA CCCGTTATTC GGTGATCGCC GGCATCATCG CCGCCATCGG CCTGTCGCTG
GTGTACCTGG CGCTGTTCTA CCTCGGCGCC ACCAGCCAGG GCATCGCGGG CGATGCGCAG
AACGGCGTGC AGGTGCTGAC CACCTACGTA CAGCACACCT TCGGCACCAC CGGCAGCCTG
TTGCTGGCCG TGGTCATCAC CCTGGCGTGC CTGACCACGG CGGTCGGTCT GTTGACCGCT
TGCGGCGAGT TCTTCAGCAA GCTGCTGCCG GTTTCTTATC GCAGCGTGGT GATCGCCTTC
GGTCTGTTCA GCCTGGTGGT GGCCAACCAG GGCCTGACCC AGCTGATCAG CTTCTCCATC
CCGGTGCTGG TCGGTCTGTA TCCGCTGGCC ATCGTGCTGG TCGCCCTGAG CCTGGCCAAT
CGCCTGTGGG TTTCCCAGTC GCTGGTCTTC GTGCCGGTGA TGGCCGTTAC GCTGATCTTC
GGTGTGGCTG ACGGTGTTGC CGCGACCCCC TGGGCCGACA AGGTTCCCGC CTGGTTCGGG
CAGCTGCCGC TGGCCGGTCA GAGCCTGGGC TGGCTGCTGC CGGTGGCGGT GACGCTGGTG
CTGGTCGTGG CGCTGGATCG CATCCTCGCG CTGCGTCAGA GCGCAACCGC CTGA
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| Protein sequence | MTRLQGSDLL ALGFMTFALF LGAGNIIFPP SAGLAAGDNL LPAALGFLLT GVGLPLLTVV
ALARVGGGMD LLTAPLGKIA GATLAVAVYL AIGPLFATPR TAVVSFEMGI APFTGNEGAP
LLIYTLVYFA AVLFLSLNPG QLVDRIGKFI TPVLLAALLV LGGAALFAPA GEIGTVAESY
RETPLVQGFL QGYLTMDTLG ALVFGIVIAS AIRDRGVSDA GLVTRYSVIA GIIAAIGLSL
VYLALFYLGA TSQGIAGDAQ NGVQVLTTYV QHTFGTTGSL LLAVVITLAC LTTAVGLLTA
CGEFFSKLLP VSYRSVVIAF GLFSLVVANQ GLTQLISFSI PVLVGLYPLA IVLVALSLAN
RLWVSQSLVF VPVMAVTLIF GVADGVAATP WADKVPAWFG QLPLAGQSLG WLLPVAVTLV
LVVALDRILA LRQSATA
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