Gene Pmen_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2457 
Symbol 
ID5107333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2722037 
End bp2723125 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID640503701 
Producthypothetical protein 
Protein accessionYP_001187945 
Protein GI146307480 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAA ATGATCGTCT GCTGGTGCAG ATTCTCCTGC TCGGTCTGCT GGCTGCCAGC 
CTCTGGGTGC TGGCGCCGTT CTGGTCCGCG CTGTTCTGGG CTGCGGTGCT GGCTTTCGCC
AGCTGGCCGC TGATGCGTCT GTTGACCCAA CTGCTCAAGG GGCGTCTGTC GCTGGCGGCG
GGCATCCTCA CCTGCGGCTG GGTGATCCTG GTGGCGGGTC CGCTGATCTG GCTGGGCTTC
AACCTGGCCG ACCACATCAA GGACGCCAAC GCGCTGATCA AGGACCTGCA GGTCGAAGGC
TTGCCGCCAC CGCCGGCCTG GCTGACAGGT CTGCCGCTGG TGGGCGAGCG GCTGGCTGCA
CTGTGGATGA CCATCGACCA GCAGGGCGCG GCCTTCTTCG CCTCCCTGCG GCCCTATCTC
GGCCAGGTCG GCAACTGGCT GCTGGCGCGT AGCGCGCAAC TCGGTGGCGG CATGCTGGAG
CTGGGCCTGA GCCTGGTGCT GGTGTTTTTC TTCTACCGTG ACGGCCCGCG TCTGGCGGTG
TTCGTTCACG GCCTGCTGGA GCGCCTGATC GGTGAGCGCG CCGACCACTA CCTGGAACTG
GTGGCCGGCA CCGTGCAGCG CGTGGTCAAC GGGGTGATCG GTACGGCCGC CGCCCAGGGC
CTGCTGGCGC TGATCGGCTT CTGGATCGCC GGGGTGCCGG GGGCGATCGT GCTGGGCATT
CTTACCTTCG TCCTCAGCCT GGTGCCGATG GGCCCGCCGC TGGTGTGGAT TCCCGCCACC
GCCTGGCTGG TGTGGCAGGG CGACTACGGC TTCGCCCTGT TCCTCGGCGT CTGGGGCATG
TTCGTCATCA GCGGCGTGGA CAACATTCTC AAGCCTTACC TGATCAGCCG CGGCGGCAAC
CTGCCGCTGG TGGTGGTGCT GCTCGGCGTG TTCGGCGGCC TGCTGGCGTT CGGTTTCATG
GGGCTGTTCC TTGGCCCGAC CCTGCTGGCA GTGGCCTACA GCCTGCTCAG CGACTGGGTG
GCGGACAAGG CGCCGCCGGC CGAGGAGGTG GTGAACAAGC CGTTGCCGGG CGAGGAGGCG
CGCGGCTGA
 
Protein sequence
MATNDRLLVQ ILLLGLLAAS LWVLAPFWSA LFWAAVLAFA SWPLMRLLTQ LLKGRLSLAA 
GILTCGWVIL VAGPLIWLGF NLADHIKDAN ALIKDLQVEG LPPPPAWLTG LPLVGERLAA
LWMTIDQQGA AFFASLRPYL GQVGNWLLAR SAQLGGGMLE LGLSLVLVFF FYRDGPRLAV
FVHGLLERLI GERADHYLEL VAGTVQRVVN GVIGTAAAQG LLALIGFWIA GVPGAIVLGI
LTFVLSLVPM GPPLVWIPAT AWLVWQGDYG FALFLGVWGM FVISGVDNIL KPYLISRGGN
LPLVVVLLGV FGGLLAFGFM GLFLGPTLLA VAYSLLSDWV ADKAPPAEEV VNKPLPGEEA
RG