Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2457 |
Symbol | |
ID | 5107333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2722037 |
End bp | 2723125 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503701 |
Product | hypothetical protein |
Protein accession | YP_001187945 |
Protein GI | 146307480 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACAA ATGATCGTCT GCTGGTGCAG ATTCTCCTGC TCGGTCTGCT GGCTGCCAGC CTCTGGGTGC TGGCGCCGTT CTGGTCCGCG CTGTTCTGGG CTGCGGTGCT GGCTTTCGCC AGCTGGCCGC TGATGCGTCT GTTGACCCAA CTGCTCAAGG GGCGTCTGTC GCTGGCGGCG GGCATCCTCA CCTGCGGCTG GGTGATCCTG GTGGCGGGTC CGCTGATCTG GCTGGGCTTC AACCTGGCCG ACCACATCAA GGACGCCAAC GCGCTGATCA AGGACCTGCA GGTCGAAGGC TTGCCGCCAC CGCCGGCCTG GCTGACAGGT CTGCCGCTGG TGGGCGAGCG GCTGGCTGCA CTGTGGATGA CCATCGACCA GCAGGGCGCG GCCTTCTTCG CCTCCCTGCG GCCCTATCTC GGCCAGGTCG GCAACTGGCT GCTGGCGCGT AGCGCGCAAC TCGGTGGCGG CATGCTGGAG CTGGGCCTGA GCCTGGTGCT GGTGTTTTTC TTCTACCGTG ACGGCCCGCG TCTGGCGGTG TTCGTTCACG GCCTGCTGGA GCGCCTGATC GGTGAGCGCG CCGACCACTA CCTGGAACTG GTGGCCGGCA CCGTGCAGCG CGTGGTCAAC GGGGTGATCG GTACGGCCGC CGCCCAGGGC CTGCTGGCGC TGATCGGCTT CTGGATCGCC GGGGTGCCGG GGGCGATCGT GCTGGGCATT CTTACCTTCG TCCTCAGCCT GGTGCCGATG GGCCCGCCGC TGGTGTGGAT TCCCGCCACC GCCTGGCTGG TGTGGCAGGG CGACTACGGC TTCGCCCTGT TCCTCGGCGT CTGGGGCATG TTCGTCATCA GCGGCGTGGA CAACATTCTC AAGCCTTACC TGATCAGCCG CGGCGGCAAC CTGCCGCTGG TGGTGGTGCT GCTCGGCGTG TTCGGCGGCC TGCTGGCGTT CGGTTTCATG GGGCTGTTCC TTGGCCCGAC CCTGCTGGCA GTGGCCTACA GCCTGCTCAG CGACTGGGTG GCGGACAAGG CGCCGCCGGC CGAGGAGGTG GTGAACAAGC CGTTGCCGGG CGAGGAGGCG CGCGGCTGA
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Protein sequence | MATNDRLLVQ ILLLGLLAAS LWVLAPFWSA LFWAAVLAFA SWPLMRLLTQ LLKGRLSLAA GILTCGWVIL VAGPLIWLGF NLADHIKDAN ALIKDLQVEG LPPPPAWLTG LPLVGERLAA LWMTIDQQGA AFFASLRPYL GQVGNWLLAR SAQLGGGMLE LGLSLVLVFF FYRDGPRLAV FVHGLLERLI GERADHYLEL VAGTVQRVVN GVIGTAAAQG LLALIGFWIA GVPGAIVLGI LTFVLSLVPM GPPLVWIPAT AWLVWQGDYG FALFLGVWGM FVISGVDNIL KPYLISRGGN LPLVVVLLGV FGGLLAFGFM GLFLGPTLLA VAYSLLSDWV ADKAPPAEEV VNKPLPGEEA RG
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