Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2423 |
Symbol | |
ID | 5108263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2674256 |
End bp | 2675785 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503667 |
Product | NADH dehydrogenase subunit M |
Protein accession | YP_001187911 |
Protein GI | 146307446 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.200315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTCC CCTGGCTAAT CCTGATCCCC TTCATCGGCG GTCTGCTGTG CTGGCAAGGC GAGCGTTTCG GCCACGTCCT GCCGCGCTGG CTCGCGCTGA TCACCATGGG CCTGCTGCTC GGCCTCGGCC TGTGGCTGTG GGCCAGCGGC GACTTCACCC TGGCGCCGGC GCCGGACGGC GGCCCGCGCT GGGCCCACGA GTTCGTCATC GACTGGATTC CGCGCCTGGG CATCACCATC CATCTGGCCA TGGACGGCCT GTCGGTGCTG ATGGTGGTGC TCACCGGCCT GCTCGGCGTG CTCTCGGTGC TGTGCTCGTG GAACGAGATC CAGCACCGCG TCGGCTTCTT CCACCTCAAC CTGATGTGGA TTCTTGGCGG CGTGGTCGGC GTGTTCCTCG CCGTCGACCT GTTCCTGTTC TTCTTCTTCT GGGAAATGAT GCTGGTGCCG ATGTACTTCC TCATCGCGCT CTGGGGTCAT AGCGGCAGCG ACGGGCGCAC CCGCATCACC GCCGCCACCA AGTTCTTCAT CTTCACCCAG GCCAGCGGCC TGATCATGCT GGTGGCGATC CTCGCCCTGG TGCTCGTGCA CTTCAACCAG ACCGGGGTGC TGACCTTCAA CTACGCCGAC CTGCTGCAGA CCGAGCTGGC GCCGGGCACC GAATACCTGC TGATGCTCGG CTTCTTCATC GCCTTCGCGG TGAAGTTCCC GGTGGTGCCG GTGCACTCCT GGCTGCCGGA CGCCCACGCC CAGGCGCCCA CCGCGGGCTC GGTGGACTTG GCCGGCATCC TGCTGAAGAC CGCCGCCTAC GGCCTGCTGC GTTTCGCCCT GCCGCTGTTC CCCAACGCCT CGGCGGAGTT CGCGCCCATC GCCCAGTGGC TGGGCGTGTT CGCCATCATC TATGGCGCCT TATTGTCCTT CGCGCAGACC GACATCAAGC GCCTGGTGGC CTACTCCAGC GTGTCGCACA TGGGCTTCGT GCTGATCGCC ATCTACTCCG GCAGCCAGAT CGCCCTGCAG GGTGCGGTGG TGCAGATGGT CGCCCACGGC CTGTCCGCCG CAGCGCTGTT CATCCTCTGC GGCCAGCTCT ACGAGCGCCT GCACACCCGT GATCTGCGCC AGATGGGCGG GATCTGGGCG CGCATGCCGT GGCTGCCGGC CATCAGCCTG TTCTTCGCCG CCGCCGCGCT GGGCCTGCCG GGCACCGGCA ACTTCGTCGG CGAGTTCCTC ATCCTGATCG GCAGCTTCCC CGGTGCCCCA TGGGTCGTGG TGATCGCCGC CACCGGCCTG GTGCTGGGCT CGGTGTACGC CCTGGCGATG ATCCACCGCG CCTATTTCGG CCCGGTGCAG CAGGATGCGC CGCTGCCCGG GCTCAAGCCG CGCGAGCTGA GCATGGTGCT CGGCCTCGCG GTCCTGCTGA TCCTGCTTGG CGTCTACCCG CAGCCGGTGC TCGACACCTC AGCCGCCAGC ATGCATGGCG TGCAGCAGTG GATGGCAGAC GCTCTCAATC AACTCGCTTC GGCCCGCTAG
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Protein sequence | MILPWLILIP FIGGLLCWQG ERFGHVLPRW LALITMGLLL GLGLWLWASG DFTLAPAPDG GPRWAHEFVI DWIPRLGITI HLAMDGLSVL MVVLTGLLGV LSVLCSWNEI QHRVGFFHLN LMWILGGVVG VFLAVDLFLF FFFWEMMLVP MYFLIALWGH SGSDGRTRIT AATKFFIFTQ ASGLIMLVAI LALVLVHFNQ TGVLTFNYAD LLQTELAPGT EYLLMLGFFI AFAVKFPVVP VHSWLPDAHA QAPTAGSVDL AGILLKTAAY GLLRFALPLF PNASAEFAPI AQWLGVFAII YGALLSFAQT DIKRLVAYSS VSHMGFVLIA IYSGSQIALQ GAVVQMVAHG LSAAALFILC GQLYERLHTR DLRQMGGIWA RMPWLPAISL FFAAAALGLP GTGNFVGEFL ILIGSFPGAP WVVVIAATGL VLGSVYALAM IHRAYFGPVQ QDAPLPGLKP RELSMVLGLA VLLILLGVYP QPVLDTSAAS MHGVQQWMAD ALNQLASAR
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