Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2408 |
Symbol | |
ID | 5108248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2657116 |
End bp | 2659119 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503652 |
Product | hypothetical protein |
Protein accession | YP_001187896 |
Protein GI | 146307431 |
COG category | [R] General function prediction only |
COG ID | [COG3211] Predicted phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.272483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0989904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAATG AACACGAACA AGACGTGCTA TTCGGCAATG GTGATGAACC GCTCAGCAAC ACTTCCGCCA ACCCCCATAT CAATGACCTT ATCGAAGCCG GCCTGAGCCG TCGCCAGGTC GTCGCTGGCG GCGCTGCGCT GGGCGTCATG GGTTTTCTCG GGGTGGCCAT GCCCGGCACC GCCGAGGCCG CAGGCAACCC GCTCAAGGAC CTGCTCGAGC GCCTGAAAAA GCGCAGCAAG CGTCTGCCGT TCAACCCGGT GGCGGTGACC CGTGCCGATA CCATCACCGT ACCGGCCGGC TACAAGGCCA CCACCTTCAT TCCCTGGGGC ACGCCGATTC GCGGCAGCTT CCCGGCTTTC CTCGAGAACG CCGGCAACAG CGCCGCCGAT CAGGCCGACC AGATCGGCAT GCACCATGAC GGCATGCACT TCTTCCCCAT TGACGGTCAG CGCGGCGGCG GTCACAAGAG CGACCACGGC CTGCTGGTAC TCAACCACGA GTACATCGAC GCGCCGCTGC TGCACCCCAA CGGCCCCACC CTGATCGGCG GCAAGCGCAG CAGCGCCGAT GAGGTTCGCA AGGAAATCAA TGCCCACGGG GTTTCCGTGG TGGAAGTGCG CTGTGTGCGC GGCCAATGGG AGGTGCTGCC CAGCGCCCGC AACCGCCGCA TCACTGGCGC CACGCCGATG CAGATCAGCG GCCCGGTACG CGGCCACGCC CTGCTCCGGA CTCGCTACAG CCCCGACGGC ACCGCCACTC GCGGCACATT GAACAACTGC GCCAACGGCT TCACCCCCTG GGGCACCTAC CTGACCTGCG AGGAAAACTG GGCCGGCTAT TTCGCCAGTG GCGATGCCGA ACGCCCGCGT GAAATGACCC GCTACGGCGT GGGCAGCGCC AGCCGTTACG GCTGGGATCA CCTGGCCGGC GACGAATTCC AGCGCTTCAA CGCCACCCGC CTGGCCGCCG ACGCCACCGG CGACTACCGT AACGAGCCGA ATCACTTCGG CTGGATCGTC GAGATCGACC CCTTCGCGCC GGAATCGGCC CCGATCAAGC GCACCGCACT GGGTCGCTTC GCCCACGAGG GCCTGGTGTT CGCCCCGGTC AAGCCGGGCC GTCCGGTGGT GTGCTATTCC GGCGACGATT CGCAGAACGA GTACATCTAC AAGTTCGTCA GCCGCGGCAA GTACGTACCG GGCCGCAGCA ACGGCAGCCT GCTCGACGAG GGCACCCTCT ACGTGGCGCG CTTCAAGGCC AATGGCAAGG GTGAGTGGCT GGCCCTGGAC ATCAAGGACA AGGCCTTCCA GGCGGCCTGC AAGGCTGCCG GAGTGAGCTT CGCCGACCAG GGCGAGGTGC TGATCAACAC CCGCCTGGCT GCCGATATCG TCGGCGCCAC CAAGATGGAT CGCCCGGAAT GGGGCGCGGT GAACCCAAAC AACGGCGATG TCTACTTCAC CCTCACCAAC AACAGCTCGC GCACCGTCGC CGACGCGGCC AACCCGCGCC CGGCCAATGC CTACGGTCAC ATCATTCGCT GGCGCGAGCA GAGCCGCGAC TATGCAGGCC GCGAGTTCGT CTGGAGCCTG TTCCTGCTGG CCGGCCCGGA GAACGACAGC CTCGACCCCA ACGGCAAACC GCTGACCGCG GACAATCGTC TGGCCAGCCC GGACGGCCTG TGGTTCGACG ATGAAGGCCG GCTGTGGATC CAGACCGACA TGAGCGGCAG CCAGCTCGCC AGCGGCCCGT TCGGTAACAA CCAGATGCTG GTTGCCGAAC CGACCACCGG CGAGGTCAAG CGCTTCCTGG TTGGCCCCGT GGGCTGCGAG GTCACCGGCA TTACCGCCAC GCCGGACTTC CGCACGCTCT TCGTCAACAT CCAGCACCCG GGCGAAGGCT CGACCCCGAC CGATTTTCGC AGCACCTGGC CGGACGGCCC CGGCCGCCGC CCGCGCTCGG CTACCGTGAT CGTCACCCGC GAAGACGGCA AACCGCTGTT CTGA
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Protein sequence | MRNEHEQDVL FGNGDEPLSN TSANPHINDL IEAGLSRRQV VAGGAALGVM GFLGVAMPGT AEAAGNPLKD LLERLKKRSK RLPFNPVAVT RADTITVPAG YKATTFIPWG TPIRGSFPAF LENAGNSAAD QADQIGMHHD GMHFFPIDGQ RGGGHKSDHG LLVLNHEYID APLLHPNGPT LIGGKRSSAD EVRKEINAHG VSVVEVRCVR GQWEVLPSAR NRRITGATPM QISGPVRGHA LLRTRYSPDG TATRGTLNNC ANGFTPWGTY LTCEENWAGY FASGDAERPR EMTRYGVGSA SRYGWDHLAG DEFQRFNATR LAADATGDYR NEPNHFGWIV EIDPFAPESA PIKRTALGRF AHEGLVFAPV KPGRPVVCYS GDDSQNEYIY KFVSRGKYVP GRSNGSLLDE GTLYVARFKA NGKGEWLALD IKDKAFQAAC KAAGVSFADQ GEVLINTRLA ADIVGATKMD RPEWGAVNPN NGDVYFTLTN NSSRTVADAA NPRPANAYGH IIRWREQSRD YAGREFVWSL FLLAGPENDS LDPNGKPLTA DNRLASPDGL WFDDEGRLWI QTDMSGSQLA SGPFGNNQML VAEPTTGEVK RFLVGPVGCE VTGITATPDF RTLFVNIQHP GEGSTPTDFR STWPDGPGRR PRSATVIVTR EDGKPLF
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