| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2402 |
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| Symbol | |
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| ID | 5108242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2650184 |
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| End bp | 2651554 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503646 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_001187890 |
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| Protein GI | 146307425 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.129184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0983593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTT CCTCGCTCAC CGCGGTTTCC CCCGTCGACG GCCGCTACGC CGGCAAAACC
AGCGCCCTGC GCCCCATCTT CAGCGAATAC GGCCTGATCC GTAGCCGCGT ACTGGTCGAA
GTGCGCTGGC TGCAGCGCCT GGCCGCCCAC GAAGGCATTC CGGAAGTCGC GCCCTTCTCC
GCCGAAGCCA ACGCCCTGCT CAACGAGCTG GCCGAGAACT TCGCCGTCGA GCACGCCGAG
CGCGTCAAGG AAATCGAGCG CACCACCAAC CACGACGTCA AGGCCGTGGA GTACCTGCTC
AAGGAGCAGG CCGCCAAGCT GCCGGAGCTG GACAAGGTCA GCGAGTTCAT CCATTTCGCC
TGCACCAGCG AGGACATCAA CAACCTGTCC CACGCCCTGA TGCTGCGCGA AGGCCGCGAC
AACGTGCTGC TGCCGCTGAT GAAGCAACTG GCAGGCGCCA TCCGCGAGCT GGCGGTGAAG
TTCGCCGACG TGCCGATGCT GTCGCGCACC CACGGCCAGC CGGCCTCGCC GACCACCCTG
GGCAAGGAAC TGGCCAACGT CGTCTACCGC CTGGAGCGGC AGATCGCTCA GGTCGCTGCC
GTGCCGCTGC TGGGCAAGAT CAACGGCGCC GTGGGCAACT ACAACGCGCA CCTGTCGGCC
TACCCGAGCA TCGACTGGGA AGCCAACGCC CGTCAGTTCA TCGAAGGTGA CCTGGGCCTG
ACCTGGAACC CCTACACCAC CCAGATCGAG CCGCACGACT ACATCGCCGA GCTGTTCGAC
GCCATCGCCC GCTTCAACAC CATCCTGATC GACTTCGACC GCGACGTCTG GGGCTACATC
TCCCTCGGCT ACTTCAAGCA GAAGACCGTG GCTGGCGAAA TCGGCTCCTC GACCATGCCG
CACAAGGTCA ACCCGATCGA CTTCGAGAAC TCCGAAGGCA ATCTGGGCAT CGCCAACGCA
ATCTTCCAGC ACCTGGCCAG CAAGCTGCCG ATCTCCCGCT GGCAGCGCGA CCTGACCGAC
TCCACCGTGC TGCGTAACCT GGGTGTCGGC TTCGCGCACA GCGTCATCGC TTATGAGGCA
AGCCTCAAGG GAATCAGCAA GTTGGAGCTC AATGCTCAAC GTATTTCTGA GGATCTGGAC
GCCTGCTGGG AAGTGCTCGC CGAGCCGATC CAGACCGTGA TGCGCCGCTA CGCCATCGAG
AACCCGTACG AGAAGCTCAA GGAGCTGACC CGCGGCAAGG GCATCAGCCC CGAGGCCCTG
CTGGCCTTCA TCGACGGCCT GGACATGCCG GCCGCCGCCA AGGAAGAGCT CAAGCAATTG
ACCCCGGCGC GCTACATCGG TAACGCCGTG GCCCAGGCCA AGCGCATCTG A
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| Protein sequence | MQLSSLTAVS PVDGRYAGKT SALRPIFSEY GLIRSRVLVE VRWLQRLAAH EGIPEVAPFS
AEANALLNEL AENFAVEHAE RVKEIERTTN HDVKAVEYLL KEQAAKLPEL DKVSEFIHFA
CTSEDINNLS HALMLREGRD NVLLPLMKQL AGAIRELAVK FADVPMLSRT HGQPASPTTL
GKELANVVYR LERQIAQVAA VPLLGKINGA VGNYNAHLSA YPSIDWEANA RQFIEGDLGL
TWNPYTTQIE PHDYIAELFD AIARFNTILI DFDRDVWGYI SLGYFKQKTV AGEIGSSTMP
HKVNPIDFEN SEGNLGIANA IFQHLASKLP ISRWQRDLTD STVLRNLGVG FAHSVIAYEA
SLKGISKLEL NAQRISEDLD ACWEVLAEPI QTVMRRYAIE NPYEKLKELT RGKGISPEAL
LAFIDGLDMP AAAKEELKQL TPARYIGNAV AQAKRI
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