Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2357 |
Symbol | |
ID | 5108199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2603149 |
End bp | 2604126 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503599 |
Product | short chain dehydrogenase |
Protein accession | YP_001187847 |
Protein GI | 146307382 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.486705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000279789 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACAAAG TCGACCATCG CGTCGTGGTG ATCTGCGGCG CCAGCGCAGG CGTGGGGCGC GCCACCGCCC ATGCTTTCGC CGCCGCCGGT TATGCCATAG GTCTGCTCGC CCGTAGCGAC GAGGGCCTGG CGCTGACCGA AGAGGAGCTG CAGGCCTATG GCGTGCCCAC CCTGGCGGTC AGTGTGGATG TGGCCGATGC GCAGGCGCTC ACCCTGGCCG GGCAACGTTT CGAAGCCGAA CTCGGCCCGG TCGATGTCTG GATCAATTCG GCGATGGTGA CGGTGTTCGC TGCGGTGGAG CAGCTGATGC CGGACGAAAT CAGGCGGGTT ACCGAGGTGA CCTATCTGGG CACGGTGCAT GGCACGCTGG CGGCGCTCGC GCTGATGCGG CCACGCAATC GCGGCGTGAT CATCCAGGTC GGTTCGGCGC TCGCCTACCG CGCGATTCCC CTGCAATCGG CCTATTGCGG GGCGAAGTTT GCGATACGGG GCTTTACCGA CTCGCTGCGC TGCGAACTGA TCCACCAGGG CAGCAGCATC AAGCTCTGCA TGGTTCAGCT GCCAGCGATC AACACGCCGC AATTCGACTG GGCCCGCAAC AAGCTGGGCA AGCGGGTGCA GCCCGTGCCT CCGATACATG ACCCCGAGGT CGCCGCACGG GCGATTCTCA GCGTCGCCAG CGCGCCGCCG AGAGAGCTCT GGGTCGGCAC GCCCACCTTC AAGGCGATCA TCGGCACCCT GCTGTTTCCC GGCTTGCTCG ATCGGCTCAT GGCACGTGCC GCGTGGTCCG GGCAGATGGT GGACGATACC CAGGCAGAGC CCGAAGCCGG AAATCTGTTC GAACCCGTGA ACGGTCTGCA CGAGGTACGT GGGCGCTTTA CCCGCAACGC GCGAAAGCAC GCCTGGACAT TGAGCGCCAG CCGGGTGGTC GCGGTGCTGG GCATCTGCGC GGTCCTGCTG GCCTTGCTGC TGATCTGA
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Protein sequence | MNKVDHRVVV ICGASAGVGR ATAHAFAAAG YAIGLLARSD EGLALTEEEL QAYGVPTLAV SVDVADAQAL TLAGQRFEAE LGPVDVWINS AMVTVFAAVE QLMPDEIRRV TEVTYLGTVH GTLAALALMR PRNRGVIIQV GSALAYRAIP LQSAYCGAKF AIRGFTDSLR CELIHQGSSI KLCMVQLPAI NTPQFDWARN KLGKRVQPVP PIHDPEVAAR AILSVASAPP RELWVGTPTF KAIIGTLLFP GLLDRLMARA AWSGQMVDDT QAEPEAGNLF EPVNGLHEVR GRFTRNARKH AWTLSASRVV AVLGICAVLL ALLLI
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