Gene Pmen_2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2336 
Symbol 
ID5108571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2579159 
End bp2580244 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content56% 
IMG OID640503578 
Producthypothetical protein 
Protein accessionYP_001187826 
Protein GI146307361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00444654 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.017631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG AGGTCTATGC CAACAACATG GAAGTGTCGT GCAAGTCGGC CGACGGCAAG 
TCCATCGCCT GCTTCCCCGA CGTCTGCTTC ACTCCACCGC AGACACCTGC CACCCCGCCC
GGCGTGCCCA TCCCCTACCC CAACACCGGC ATGGCCAAGG ACACCACCAA CGGCACCCGT
ACGGTAAAGA TCACCGGCAA GGAAGTAATG CTCAAGAACA AGAGCTACTT CAAAACCAGC
TACGGCGACG AGGCCGGCTG CGCGCCGAAG AAGGGTGTGA TTACCAGCAA GATCAAGGGC
AAGGTGTATT TCACCTCATG GTCGATGGAT GTGAAGTTCG AGGGGGAAAA TGTCGTTCGG
AACTTGGATA TGACGACGCA CAACCATGCG TCAATGCCGG GGAATACGCC TCTCTGGCCG
TATATCGACG CAGTTGCAGC GGCGGCTAAC CCTTCCGATC CCTGTCATAA AGTCACCAAA
GGCTTGGCTG ATAATGATTG CCAGCGGCAT GTCAAAGCCA ATACGTACTC CACCGGTTCG
GTGAACAGGG CTGGAGCTTC CGAAGCGCTA TGCAACGATC CCAAATGCAA GGCGGCGATG
GCCTGTGTCC TGACCCCCTA CAGTCCATCA AATTGCTGTG ACGGAAAAAC ACCTCACCAT
ATCGTGCCAA AGTCCCAGTT CAAGGAGCGT GGCAAAGGCG GCAAGGCTCT GTTGCTGGAT
TCCAACGGCG ATAACAAGTA CGACCCAGAC AAAGCCCCTT GCATCTGTGA GGATGGACAC
AGCCATTCCA CCGGCACCCA TGGTGACATC CATGAGGAGA CCAACTTGTT AACGGTAACG
CACCCGAAGG TGTCTCCACA CGTGACTGGA AAGACGATCG ATCCCAATGC TCGTTGGGAC
GTCGCTGATG CGGAAGCCGT TGGTGCAAAG GCCACCAAAA AAGGTGGCAG CCAGTGCGAT
GAGGAATGCA CTAAAAGTCA GGTAAGAGCT GGTCACCAGC AGATGGGCAT CGGACCGAAT
GACAAGATAC GTCCTTCGAC CGCCGGCCAT GTGCCGGAAC CCTCCAACCC AACCACTTTC
CCATAG
 
Protein sequence
MANEVYANNM EVSCKSADGK SIACFPDVCF TPPQTPATPP GVPIPYPNTG MAKDTTNGTR 
TVKITGKEVM LKNKSYFKTS YGDEAGCAPK KGVITSKIKG KVYFTSWSMD VKFEGENVVR
NLDMTTHNHA SMPGNTPLWP YIDAVAAAAN PSDPCHKVTK GLADNDCQRH VKANTYSTGS
VNRAGASEAL CNDPKCKAAM ACVLTPYSPS NCCDGKTPHH IVPKSQFKER GKGGKALLLD
SNGDNKYDPD KAPCICEDGH SHSTGTHGDI HEETNLLTVT HPKVSPHVTG KTIDPNARWD
VADAEAVGAK ATKKGGSQCD EECTKSQVRA GHQQMGIGPN DKIRPSTAGH VPEPSNPTTF
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