Gene Pmen_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2333 
Symbol 
ID5108568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2576561 
End bp2576995 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content70% 
IMG OID640503575 
Producthypothetical protein 
Protein accessionYP_001187823 
Protein GI146307358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00580597 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00510153 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGTTC AATACTTCCT GCCCAGCCAG GCGCGCCTCG ACGGCGTGAT GATCGGCACC 
CTGCTCGCCC TGCCCGACGA CGGCTCGCCG CGGGTGAGCT TTCCCGGTTG CGCCGACGCA
CAGGGCCTTG TCGCCCGCAG CATGGCGGCA CTGACCGGTG CGGACATCGG CGCCCAGGTC
GCGCTGATGT TCGAGAACGG CGACCCGCTG CGCCCGCTGG TGGTCGGCCG GCTGCTCGGC
GCGGCGTCAG CAGCGCAGGT GAAGCTCGAT GATGAGCGCC TGGAGCTGCG CGCCGAGCAG
GAAATCGTGC TGCGCTGCGG CAAGGCCAGC ATCACCCTGA CCCGCGCCGG CAAGGTGATC
ATCCAGGGCG CCTACCTCTC CAGCCGCTCC AGCGGGGTCA ACCGCATCAA GGGCGGCTCG
GTGCAGATCA ACTAG
 
Protein sequence
MTVQYFLPSQ ARLDGVMIGT LLALPDDGSP RVSFPGCADA QGLVARSMAA LTGADIGAQV 
ALMFENGDPL RPLVVGRLLG AASAAQVKLD DERLELRAEQ EIVLRCGKAS ITLTRAGKVI
IQGAYLSSRS SGVNRIKGGS VQIN