Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2333 |
Symbol | |
ID | 5108568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2576561 |
End bp | 2576995 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640503575 |
Product | hypothetical protein |
Protein accession | YP_001187823 |
Protein GI | 146307358 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00580597 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00510153 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGTTC AATACTTCCT GCCCAGCCAG GCGCGCCTCG ACGGCGTGAT GATCGGCACC CTGCTCGCCC TGCCCGACGA CGGCTCGCCG CGGGTGAGCT TTCCCGGTTG CGCCGACGCA CAGGGCCTTG TCGCCCGCAG CATGGCGGCA CTGACCGGTG CGGACATCGG CGCCCAGGTC GCGCTGATGT TCGAGAACGG CGACCCGCTG CGCCCGCTGG TGGTCGGCCG GCTGCTCGGC GCGGCGTCAG CAGCGCAGGT GAAGCTCGAT GATGAGCGCC TGGAGCTGCG CGCCGAGCAG GAAATCGTGC TGCGCTGCGG CAAGGCCAGC ATCACCCTGA CCCGCGCCGG CAAGGTGATC ATCCAGGGCG CCTACCTCTC CAGCCGCTCC AGCGGGGTCA ACCGCATCAA GGGCGGCTCG GTGCAGATCA ACTAG
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Protein sequence | MTVQYFLPSQ ARLDGVMIGT LLALPDDGSP RVSFPGCADA QGLVARSMAA LTGADIGAQV ALMFENGDPL RPLVVGRLLG AASAAQVKLD DERLELRAEQ EIVLRCGKAS ITLTRAGKVI IQGAYLSSRS SGVNRIKGGS VQIN
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