| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2330 |
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| Symbol | |
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| ID | 5108565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2570613 |
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| End bp | 2571599 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503572 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187820 |
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| Protein GI | 146307355 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0196244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0188042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGACG CACCCTGGAG CTACGATTTC TTCCAGGCGC TGCGGCGTAT CGAGTGCGAG
GCGGCCGACC GGCCGCGCCT CGGCCATTCG GTGCGCCTGG CCGACGATCC GCTGCGCCTC
GGCCAGCAGC CCGAATGCGG TTTTGCCCCC TCGACCCTGG CCAGCGTGCA ACCGGGCCAG
GTGCCGCGCA TCGAACAATT CTTCTTCGGT CTGACCGGCC CCAACGGCCC GCTGCCCCTG
CATCTGACCG AATACGCCCG CGAGCGCCAG CGCAACGCCG GCGACCCCAC CTTCAAGCGC
TTCCTCGACG TCTTTCATCA TCGCCTGCTC ACCCTGTTCT ATCGCGCCTG GGCCGAATCC
CGCCCGACCG TCAGCCATGA CCGGCCGGAT GACGACTACT GGTCGATGCG CCTGGCGGCG
CTATCCGGAC GCGGCATGAC CAGCCTGCTC GGCCAGGGCC CGCTGGCCGA TTCGGCGAGC
CTGCACTACA GCGGCCACCT GGCGGCGCAG ACCCGCTACC CGGATGGACT GCGCGCCATT
CTCGAACACT ATTTCGAGGT GCCGGTGAGC ATCGAGGAAT ACGTCGGCCA ATGGCTGCAG
CTGCCGCATT ACAGCCAGGT CGGCGCGGCC GCCTGCACGC TGGGTAGCGA CCTGTGCCTG
GGTTCCCACG TGTGGGATCG CCAACACAAG TTCCGTATCC GCCTCGGCCC ACTGAGCCTC
GAGCAATACC AGCGCCTGCT GCCGGGGCAG GAGAACTTCG CCGAGCTGGC GGCCTGGGTC
GCCGAACATC AGGGCGACGA ACTGGATTGG GAGGTGAACC TGGTGCTGCA TTGCCAGGAG
ACGCCGCGCA TCGATCTCGA CGGCCGCACC CAGCTCGGCT TCAACACTTG GCTCGGCACA
CCGCTACAGG ACCCCGACGA CCTGCTGCTG GTGCGCGACT ACGCCAGCCG GCAAACCACC
GAATCAAGGA GCTGCGAACA TGAGTGA
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| Protein sequence | MVDAPWSYDF FQALRRIECE AADRPRLGHS VRLADDPLRL GQQPECGFAP STLASVQPGQ
VPRIEQFFFG LTGPNGPLPL HLTEYARERQ RNAGDPTFKR FLDVFHHRLL TLFYRAWAES
RPTVSHDRPD DDYWSMRLAA LSGRGMTSLL GQGPLADSAS LHYSGHLAAQ TRYPDGLRAI
LEHYFEVPVS IEEYVGQWLQ LPHYSQVGAA ACTLGSDLCL GSHVWDRQHK FRIRLGPLSL
EQYQRLLPGQ ENFAELAAWV AEHQGDELDW EVNLVLHCQE TPRIDLDGRT QLGFNTWLGT
PLQDPDDLLL VRDYASRQTT ESRSCEHE
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