| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2283 |
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| Symbol | |
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| ID | 5108518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2517049 |
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| End bp | 2518317 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503525 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001187773 |
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| Protein GI | 146307308 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0243543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000541864 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCAG TGGTTTTCCA CGATATCGGC GACATCCGTC TCGACGAAGT GCCCGAGCCT
CAGGTGCAGG CCAGCACCGA TGCGGTGATC CGCATCACCG CATCGGCCAT CTGCGGCACC
GATCTGCACT TCGTCCGCGG CACCGTCGGC GGCATGCGCA AGGGCACCAT CCTCGGCCAC
GAGGCGGTCG GCATCGTCGA GGCCCTGGGC AGCGACGTGC GCAACCTGAG CATCGGTGAC
CGCGTCGTGG TGCCCTCCAC CATCGCCTGC GGCAACTGCG CCTACTGCCG CGCCGGTTAC
TACGCGCAAT GCGACGAGGC CAACCCCAAC GGCAAGGAGG CCGGCACCTC CTTCTACGGC
GGCCCGGAGA TCACCGGCGC CTTCGACGGC CTGCAGGCGG AACTGGCACG TATCCCCTTC
GCCAATATCG GCCTGGTCAA GCTGCCCAGC GAGATCAGCG ACGATCAGGC CATCCTGCTG
TCGGACATCT TTCCCACCGG CTACTTCGGC GCCAAGCTGG CGGAAGTCAG CAGCGGCGAC
ACCGTGGCGG TGTTCGGCTG CGGCCCGGTG GGCCAGTTCG CCATCGCCAG TGCCAAGTTG
CTCGGCGCGG CGCGGGTGTT CGCCATCGAC CACCTCGACG ACCGCCTGGA CATGGCGCGC
CGTCAGGGCG CCGAGGTGAT CCATTTCGAC CGTGAAGACC CGGTCGACAC CCTGCGCCGG
CTGACCAACG GCATCGGCGT CGACCGCGCC ATCGATGCCG TCGGCGTCGA CGCCCAGTGC
CCCGCCCATG GCCACGCGCC GGGTAACGGC GAGAACGCCC AGTGGCAGCC CGGCGATGCG
CCCGAGCAGG CCCTGCAGTG GGCCGTGGAT GCCCTGGCCA AGGCCGGCAC CCTGGCCATC
GTCGGCGTCT ATCCGCATCA GGCGCGCGAG TTTCCCATCG GTCAGGCGAT GAACAAGAAC
CTCACCGTCA ACATGGGCAA CTGCAACCAC CGCCGCTACA TCCCCGAGCT GATCGAGATG
GTCCAGGCCG GGCGCATCGA TCCGGCGAAG ATCCTCACCC AGGTCAAGCC GATGAGCGAT
GCCATCGAAG CCTTCAAGGC GTTCGATCGC CGCGACAGCG GCTGGATCAA GGTGCAGCTG
CGCCCGGCCC GCAACGACGC CGTCAACGGC AGCGAGGAGC GCGTGGACGG CGGCCCGATC
CTCGACCGCG CCATCGCCGA AGCCGACCCG CTGAAAGAAT CCCGGTCGAA GAAACCGGGT
CGCCTGTGA
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| Protein sequence | MKAVVFHDIG DIRLDEVPEP QVQASTDAVI RITASAICGT DLHFVRGTVG GMRKGTILGH
EAVGIVEALG SDVRNLSIGD RVVVPSTIAC GNCAYCRAGY YAQCDEANPN GKEAGTSFYG
GPEITGAFDG LQAELARIPF ANIGLVKLPS EISDDQAILL SDIFPTGYFG AKLAEVSSGD
TVAVFGCGPV GQFAIASAKL LGAARVFAID HLDDRLDMAR RQGAEVIHFD REDPVDTLRR
LTNGIGVDRA IDAVGVDAQC PAHGHAPGNG ENAQWQPGDA PEQALQWAVD ALAKAGTLAI
VGVYPHQARE FPIGQAMNKN LTVNMGNCNH RRYIPELIEM VQAGRIDPAK ILTQVKPMSD
AIEAFKAFDR RDSGWIKVQL RPARNDAVNG SEERVDGGPI LDRAIAEADP LKESRSKKPG
RL
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