Gene Pmen_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2218 
Symbol 
ID5109163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2453347 
End bp2453658 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content56% 
IMG OID640503462 
Producthypothetical protein 
Protein accessionYP_001187710 
Protein GI146307245 
COG category 
COG ID 
TIGRFAM ID[TIGR02953] pentapeptide MXKDX repeat protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0197507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTT TTATGAAGCG TAATGCCCTG TTTGGCAGCG CAGCGATGTT CAGTCTTTTG 
GCTGTTCTGC ACGCGCCGAC GTCATTGGCA GGTGAGGGGC ACAGCGAGCA CGAACAACAT
GCTGCCGAGT CGGCTGCGCC CGACGCCAGT GACAAGCCTG CAGATCAATC GAAAGGCAAG
GCCGCTGGCC ATCAGATGGA TCATGGCGCC ATGGATCATG AGGGTATGAA CCATGACGAT
ATGGGGCACG AGAAGATGAT GGATAAGCAT GGCGGCACCG AAGCCGAAGC AGGTTCGAAC
CATGACCACT AG
 
Protein sequence
MSTFMKRNAL FGSAAMFSLL AVLHAPTSLA GEGHSEHEQH AAESAAPDAS DKPADQSKGK 
AAGHQMDHGA MDHEGMNHDD MGHEKMMDKH GGTEAEAGSN HDH