Gene Pmen_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2216 
Symbol 
ID5109161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2451414 
End bp2452256 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content58% 
IMG OID640503460 
Producthypothetical protein 
Protein accessionYP_001187708 
Protein GI146307243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0103388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA CAATTAAAAC TTTGGTGGCG GCCGGCGTGG TCGGTAGCAC AGCTGTCCTG 
GCCGGCGCCT ACTTTGGCGT GGTCAACGTG GGGGCCGACG ATCCCCATTT TCCTGCAGTG
CATGCGTTTC TCACGATGGC CCGTGACCGC TCTATCGAAG TCCGTTCGCG GGACATCGAG
GTTCCCAACC TGGATGATCA AGCTCTTATT CGCGCCGGTG CGGGCAACTA CAACTCCATG
TGTATCGGCT GTCATTTGGC GCCAGGTGTG GCGGAGACCG AGCTAAGCCA ATCGCTTTAT
CCTGCGCCCC CCAACCTCGC CAAGATCGGT GTCGATGGCA ATCCGTCAGC AGCGTTCTGG
GTGATCAAGC ATGGCATCAA GGCAACGGGT ATGCCTGCGT GGGGCAAGAG CATGGGAGAC
GAGTACATCT GGGGCATGGT TGCCTTCCTC AACCAACTGC CGACGATGGA TGCCAAGCAA
TACCAAACAC TCGTCGCATC CAGTGGCGGC CATCAGCACG GTGGTGGGGA AACGCAGATG
CATAACCATG AAGGACAGCA CGGCGACAAC AAGCCTGGCC ATCATGACAA TAGTGGCGGT
GGCGATGACC ATCATGGATC AGGTGATGCT GGAGAGCCTG GTCATCACGA TGCCGCGGCT
ACGGATAGCG AGGGTGGCTC CGCACCTAAG GCAGGTCACC ATTCGGATAT GAGTGGCGAT
GACCACCATG CTGGAGATGA GGCGTCGTCC AACGGAGGTG ATCATCACGC CGAGCAGGCT
CCGAACGCCT CGCCCAAGAC CCACACCCAC GCCGATGGCA AAGAGCACGT ACATGAAAGC
TAA
 
Protein sequence
MKRTIKTLVA AGVVGSTAVL AGAYFGVVNV GADDPHFPAV HAFLTMARDR SIEVRSRDIE 
VPNLDDQALI RAGAGNYNSM CIGCHLAPGV AETELSQSLY PAPPNLAKIG VDGNPSAAFW
VIKHGIKATG MPAWGKSMGD EYIWGMVAFL NQLPTMDAKQ YQTLVASSGG HQHGGGETQM
HNHEGQHGDN KPGHHDNSGG GDDHHGSGDA GEPGHHDAAA TDSEGGSAPK AGHHSDMSGD
DHHAGDEASS NGGDHHAEQA PNASPKTHTH ADGKEHVHES