Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2216 |
Symbol | |
ID | 5109161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2451414 |
End bp | 2452256 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640503460 |
Product | hypothetical protein |
Protein accession | YP_001187708 |
Protein GI | 146307243 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0103388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA CAATTAAAAC TTTGGTGGCG GCCGGCGTGG TCGGTAGCAC AGCTGTCCTG GCCGGCGCCT ACTTTGGCGT GGTCAACGTG GGGGCCGACG ATCCCCATTT TCCTGCAGTG CATGCGTTTC TCACGATGGC CCGTGACCGC TCTATCGAAG TCCGTTCGCG GGACATCGAG GTTCCCAACC TGGATGATCA AGCTCTTATT CGCGCCGGTG CGGGCAACTA CAACTCCATG TGTATCGGCT GTCATTTGGC GCCAGGTGTG GCGGAGACCG AGCTAAGCCA ATCGCTTTAT CCTGCGCCCC CCAACCTCGC CAAGATCGGT GTCGATGGCA ATCCGTCAGC AGCGTTCTGG GTGATCAAGC ATGGCATCAA GGCAACGGGT ATGCCTGCGT GGGGCAAGAG CATGGGAGAC GAGTACATCT GGGGCATGGT TGCCTTCCTC AACCAACTGC CGACGATGGA TGCCAAGCAA TACCAAACAC TCGTCGCATC CAGTGGCGGC CATCAGCACG GTGGTGGGGA AACGCAGATG CATAACCATG AAGGACAGCA CGGCGACAAC AAGCCTGGCC ATCATGACAA TAGTGGCGGT GGCGATGACC ATCATGGATC AGGTGATGCT GGAGAGCCTG GTCATCACGA TGCCGCGGCT ACGGATAGCG AGGGTGGCTC CGCACCTAAG GCAGGTCACC ATTCGGATAT GAGTGGCGAT GACCACCATG CTGGAGATGA GGCGTCGTCC AACGGAGGTG ATCATCACGC CGAGCAGGCT CCGAACGCCT CGCCCAAGAC CCACACCCAC GCCGATGGCA AAGAGCACGT ACATGAAAGC TAA
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Protein sequence | MKRTIKTLVA AGVVGSTAVL AGAYFGVVNV GADDPHFPAV HAFLTMARDR SIEVRSRDIE VPNLDDQALI RAGAGNYNSM CIGCHLAPGV AETELSQSLY PAPPNLAKIG VDGNPSAAFW VIKHGIKATG MPAWGKSMGD EYIWGMVAFL NQLPTMDAKQ YQTLVASSGG HQHGGGETQM HNHEGQHGDN KPGHHDNSGG GDDHHGSGDA GEPGHHDAAA TDSEGGSAPK AGHHSDMSGD DHHAGDEASS NGGDHHAEQA PNASPKTHTH ADGKEHVHES
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