Gene Pmen_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2198 
Symbol 
ID5109143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2430468 
End bp2431001 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content61% 
IMG OID640503442 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001187690 
Protein GI146307225 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.185555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00320999 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCCCG GGCGCCTCGA GGAGGCGGGC TCCAATCGGA TTAACGAGGA CTCCCTCATG 
GCCCACATGA TTAAGGTCAA CGGCAAAGAG CACCAGGTGG ATGTCGATGA CGATACCCCG
CTACTGTGGG TGCTACGCGA TGTGCTCGGG ATGACCGGCA CCAAGTTCGG ATGCGGCATG
GCATTGTGCG GCGCATGCAC CGTGCACATG AATGGAAACG CGGTGCGCTC GTGCATTATG
CCGATCAATG CGGTGGTGGG TTCCGAGATC ACGACCATCG AAGCGATTGG GGAAACGCCG
GCCGGCAAAC GCATACAGGA CGCCTGGTTG GCTCATGAGG TGGTCCAGTG TGGCTACTGC
CAGTCGGGTC AGATCATGTC TGCCAGCGCT TTGCTGGCGC GCAATGCCAA TCCAAGCGAC
AGCGACATCG ACGGCGCGAT GGCCGGCAAT ATCTGTCGCT GCGGAACCTA CGTACGCATA
CGCGAAGCCA TCAAGTCTGC TGCCGGGCAG CCCGTTGCGC AGGTGGAGGG GTAA
 
Protein sequence
MRPGRLEEAG SNRINEDSLM AHMIKVNGKE HQVDVDDDTP LLWVLRDVLG MTGTKFGCGM 
ALCGACTVHM NGNAVRSCIM PINAVVGSEI TTIEAIGETP AGKRIQDAWL AHEVVQCGYC
QSGQIMSASA LLARNANPSD SDIDGAMAGN ICRCGTYVRI REAIKSAAGQ PVAQVEG