| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2174 |
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| Symbol | |
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| ID | 5109514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2399615 |
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| End bp | 2401249 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503418 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001187666 |
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| Protein GI | 146307201 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00506259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAGTT TGCGTAGTCT TCCCATCAGC CGTCGTCTGT GGCTGATCCT GGCGCTGGCC
ATCCTGATGT TGGTGCTTCA GGGCGCCTAT ATGCTGCGGC AGATCAACCT CGATCTGTAC
GCCAGCAAGG CCGAGAAGAC CGAGCACGTG GTGCAGAGTG CGGCCGGCAT CCTCAAACAT
TATCAAGGCC TGGAAAGCGC CGGCAGCCTG AGCCGCGAGG AAGCGCAGAA GCAGGCGATG
GAAGTCATCC GCGGTCTGCG CTACGACGGC CAGGAGTACT TCTGGATCAA CGACCAGACC
CCGGTCATGC TCATGCATCC GATGAATGCC AAGCTCGAGG GCCAGAACCT TTCCGGCTTC
AAGGATCCGG ACGGCAAGGC GCTGTTCAAC GAGATGGTCG CCATCACCCG CAGCCAGGGG
GCTGGCCAGG TCGACTACCG CTGGCCGAAA CCTGGCGCCA CTGACCCGGT ACCGAAGATC
TCCTACGTCG AACTCTTTCA GCCCTGGGGC TGGATCATCG GCTCCGGCGT GTATGTCGAC
GATGTCCAGG CCGAGTTCAG GACCCAGGCG ATGCGTGCGG TGGGCATGGG TCTGCTGATC
GTGCTGCTGC TGACCGCTCT GGTCGTGCTG ATTACCCGCA GCATCGCGCA GCCCTTGCAA
ATAGCGGTAG ATGCCATGGC CAACATCGCC AGCGGTGAAG GCGATCTCAC CCGCAACCTC
GACACTCATG GCCGCGACGA ACTCACCGCC CTGGCCACGC ATTTCAATGC CTTTACCGAC
AAGCTGCGTC GGGTGATCGG CCAGCTGCTC GAATCTGCCG GCTCGCTGGA CCAGGCCGCG
CGCTCGCTGG GCGACATTTC CAGCGAAGCA CAGCGACACA GCCAGCAACA GGCGCAGCAG
ATGGAACTGG TGGCCACGGC GGTCAATGAA GTGACCTATG GCGTGCAGGA CGTGGCGAAG
AACGCCGAAC ATGCCTCCAG CGAAATGCAT ACGGCCGAAG AGCAGGCCAG CCAGGGCCAG
CAGAACATCA ATGCCAGCCT GCGCCAGATC GACCAGCTTT CCGGGACCAT CGACAAGGCC
GTGGAAGTGA TCCAGTCGCT GGCCAGCGAA AGCACGCAGA TCGGCAGCGT GCTGGAGGTG
ATCCGCTCGA TCGCCGAACA GACCAACCTG CTCGCCCTGA ATGCCGCCAT CGAAGCGGCC
CGAGCCGGCG AGCAGGGTCG CGGCTTCGCC GTGGTCGCCG ACGAGGTCCG CTTGCTGGCA
CAGCGCACGC AGCAGTCCAC CGCCGAGATC CAGGGCATGA TCGAGCGCCT GCAGAGCAAT
TCCGAGGCGG CGGTCAAGGT CATCCATGAC AGCAGCCGTG CGTCACAATT AACGGTGGAA
CAGGCAAGCC AGGCTGGCGA AAGTCTGGCG CAGATCGCAC AATCGCTGCG CAATCTGACC
GGGCTCAACG CCTCGATCGC CAGCGCCACC CTGCAGCAGT CGCACGTGGT GGAAGACATC
AATCAGAACG TCACGCAGAC GGCCGCTCTC GCCCATAACA CGGCCGAAGC CGCCGAACAG
TCGAGTGCGG CCAGCCAGCA TCTGAAACAG CTGGCCGATC AGCTCGGTCG CCTGCTGGGA
CAGTTCCGCA TATGA
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| Protein sequence | MNSLRSLPIS RRLWLILALA ILMLVLQGAY MLRQINLDLY ASKAEKTEHV VQSAAGILKH
YQGLESAGSL SREEAQKQAM EVIRGLRYDG QEYFWINDQT PVMLMHPMNA KLEGQNLSGF
KDPDGKALFN EMVAITRSQG AGQVDYRWPK PGATDPVPKI SYVELFQPWG WIIGSGVYVD
DVQAEFRTQA MRAVGMGLLI VLLLTALVVL ITRSIAQPLQ IAVDAMANIA SGEGDLTRNL
DTHGRDELTA LATHFNAFTD KLRRVIGQLL ESAGSLDQAA RSLGDISSEA QRHSQQQAQQ
MELVATAVNE VTYGVQDVAK NAEHASSEMH TAEEQASQGQ QNINASLRQI DQLSGTIDKA
VEVIQSLASE STQIGSVLEV IRSIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRLLA
QRTQQSTAEI QGMIERLQSN SEAAVKVIHD SSRASQLTVE QASQAGESLA QIAQSLRNLT
GLNASIASAT LQQSHVVEDI NQNVTQTAAL AHNTAEAAEQ SSAASQHLKQ LADQLGRLLG
QFRI
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