| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2164 |
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| Symbol | |
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| ID | 5109504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2389724 |
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| End bp | 2390746 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503408 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001187656 |
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| Protein GI | 146307191 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.124166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0201995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGC TCAGAACCAT CGCCTGCCTG ACCTACCCCG ACGTCATGAG CCTGGACGTT
ACCGGGCCGC TGCAGGTATT CGCCTCGGCC AACGTCGAGC GCCAGCGTCA GGGGCTGCCG
CCCTGCTACC AGATCTGCCT GCTAGGCGAA GCGCCCGGCC CGGTCAGCAC CTCGGCAGGC
ATTCAGCTGG TTGCCGACAG CGCCTGGCGC AGCGCCGATG CCAGGCAGAT CGACACGCTG
CTGGTGCCAG GCGGGCCGGG CGTGGAGCGT CAGTGTCAGC ATGCGGCACT GCTGAACTGG
TTGCGGGACG TCGAGCCGCA GGTACGGCGG CTCGGCTCGG TGTGCTCCGG CGCGCTGATC
CTGGCTGCCG CCGGGTTGCT CGATGGGCGC CGCGCCACCA CTCACTGGGC CGATGTGCAG
ACCTTGCGCG ATGGCTATTC GCAGGTCGAG GTCCTGGCTG ACTGCCTGCA TACCTACGAC
CCGCACGACC GTGACGGCAA TGGGCACATC TTCACTTCGG CCGGCGTGAC CGCGGGCATC
GATCTGGCCC TGGCGATGAT AGAAGCCGAC CTGGGACGCG CGCTGGCCCT GGCGGTCGCT
CGCCGCCTGG TGATGTTTCT GCGCCGCCCC GGCGGCCAGG CGCAGTTCAG CGCCCTGCTC
AGCCCGGAAC CTAGCCGGGT GCCGCGGCTT GCCGCCTTGC TCGAATGGAT TCCCGCACAT
CTCGGTGACG ACCTGTCGCT AGAGGCGCTC GCTGCTCAGG CGCACATGAC GCCACGCACG
CTGTCGCGGG TGTTCGTTCA GGAGCTGGGC ATGGGGCCGG GCCGCTACGT CGAGCGGGTG
CGCCTTGAGG CCGCGCGCAA TCTGCTGCAG GACGCCCAGG CCTCGATCGC CACGGTGGCC
CGCCTGACCG GTTTCGGCCA CGCGGAGAAC CTGCGCCGCA GCTTTCACAA ACACCTGGCC
ATCAGCCCGC AGGACTACCT GCAGCGCTTC GGCCAGGCAC GCCAGGAGAA CCTGAATGCT
TGA
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| Protein sequence | MDALRTIACL TYPDVMSLDV TGPLQVFASA NVERQRQGLP PCYQICLLGE APGPVSTSAG
IQLVADSAWR SADARQIDTL LVPGGPGVER QCQHAALLNW LRDVEPQVRR LGSVCSGALI
LAAAGLLDGR RATTHWADVQ TLRDGYSQVE VLADCLHTYD PHDRDGNGHI FTSAGVTAGI
DLALAMIEAD LGRALALAVA RRLVMFLRRP GGQAQFSALL SPEPSRVPRL AALLEWIPAH
LGDDLSLEAL AAQAHMTPRT LSRVFVQELG MGPGRYVERV RLEAARNLLQ DAQASIATVA
RLTGFGHAEN LRRSFHKHLA ISPQDYLQRF GQARQENLNA
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