Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2130 |
Symbol | |
ID | 5109470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2352301 |
End bp | 2352873 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640503374 |
Product | translation initiation factor 5A (eIF-5A) |
Protein accession | YP_001187622 |
Protein GI | 146307157 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0576423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.464149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACTG CACAAGAAAT GAGAGTCAAC AGCGTGGCCC TGATCGATGG CCAGCCGTGG CTGATCCAGA AGGCCGAGTT CACCAAGTCC GGTCGTAACA GCGCCATCGT CAAGATGAAG CTGAAGAACC TGCTCAACGG TTCCAAGACC GAGACCGTCT ACAAAGCCGA CGACAAGATG GAGCCGGTGA TTCTCGAGCG CAAGGAAGTG AACCTGTCCT ACATCAGCGG TGAGGACTAC GTGTTCATGG ATCCGGAGTA CAACTCCTAC GAGCTGCGTG CCGAAGATCT GGAAAGCGTT CTGCCGTTCA TCGAAGAAGG CATGACCGAC GTCTGCGAAG CCGTGTTCTT CGAAGGCAAG GTGATCTCCG TCGACCTGCC GACCACCATC GTGCGTCAGG TTGTCTACAC CGAGAACGCT GCTCGTGGCG ACACTTCCGG CAAGGTGATG AAGCCTGCCA AGCTGCGCAA CGGTACCGAG ATCAAGGTTG CCGAGTTCGT CGACATCGAC GACTGGATCG AGATCGATAC CCGTGACGGT TCCTACAAGG GCCGCACCCA GGCTCCGGCC TGA
|
Protein sequence | MKTAQEMRVN SVALIDGQPW LIQKAEFTKS GRNSAIVKMK LKNLLNGSKT ETVYKADDKM EPVILERKEV NLSYISGEDY VFMDPEYNSY ELRAEDLESV LPFIEEGMTD VCEAVFFEGK VISVDLPTTI VRQVVYTENA ARGDTSGKVM KPAKLRNGTE IKVAEFVDID DWIEIDTRDG SYKGRTQAPA
|
| |