| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2103 |
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| Symbol | |
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| ID | 5109837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2332626 |
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| End bp | 2333417 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503347 |
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| Product | nitrate ABC transporter, ATPase subunits C and D |
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| Protein accession | YP_001187596 |
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| Protein GI | 146307131 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0097031 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0581699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAGT TCGTGGAGCT GACCGCCGTC AGCAAGCACT TCGACACCAA GAAAGGCCGC
TTCCAGGCGC TGGCAGACGT CAACCTGAGC ATCGCCCGCG GCGAGTTCGT CGCGTTGATC
GGCCATTCCG GCTGCGGCAA ATCCACCGTG CTCAACCTGA TCGCCGGCCT GCTCGAGGCC
AACGAAGGCG GCTTGATCTG CAACGGCCGC GAGATCGACG GGCCCGGCCC GGAGCGCGCC
GTGGTGTTCC AGAACCACAG CCTGCTGCCC TGGATGACCT GCTTCGGCAA CGTCCATCTG
GCCGTGGAGA AGGTCTTCGG CGCGCGCGAA AGCAAGGCCC AGCTCAAGGC CCGCACCGAG
CAGGCCCTGA ACATGGTCGG CCTCAGCCAT GCCATGCACA AGCATCCCAA CGAGATCTCC
GGCGGCATGA AGCAGCGCGT CGGCATCGCC CGCGCCCTGG CCATGGAGCC CAAGGTGCTG
CTGATGGACG AGCCGTTCGG CGCCCTCGAT GCCCTGACCC GCGCGCACCT GCAGGACGAG
CTGCTGCGTA TCGTCGGGCA GACCCAGAGC ACCGTGGTGA TGGTCACCCA TGACGTCGAC
GAAGCCGTGC TGCTGTCCGA TCGCATCGTG ATGATGACCA ACGGCCCGGC CGCCACCGTC
GGCGAAATTC TCGCCGTCGA CCTGCCGCGC CCGCGCGACC GCCTGGCACT GGCCAACGAC
CCGCAGTACC ACGCCTACCG CACCGCGGTG CTGGAGTTCC TCTACCAGCG TCAGCAGCGA
CCGGCCGCCT GA
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| Protein sequence | MDKFVELTAV SKHFDTKKGR FQALADVNLS IARGEFVALI GHSGCGKSTV LNLIAGLLEA
NEGGLICNGR EIDGPGPERA VVFQNHSLLP WMTCFGNVHL AVEKVFGARE SKAQLKARTE
QALNMVGLSH AMHKHPNEIS GGMKQRVGIA RALAMEPKVL LMDEPFGALD ALTRAHLQDE
LLRIVGQTQS TVVMVTHDVD EAVLLSDRIV MMTNGPAATV GEILAVDLPR PRDRLALAND
PQYHAYRTAV LEFLYQRQQR PAA
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