| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2096 |
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| Symbol | |
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| ID | 5109830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2322945 |
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| End bp | 2325401 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503340 |
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| Product | assimilatory nitrite reductase (NAD(P)H) large subunit precursor |
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| Protein accession | YP_001187589 |
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| Protein GI | 146307124 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.115121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC TCAAGCTGGT GATGATCGGC AACGGCATGG CGGGTGTACG CACCCTCGAG
GAGCTGCTCA AGCTCGCCCC CGACCTCTAC GACATCACCG TGTTCGGCGC CGAGCCGCAC
CCCAACTACA ACCGCATCCT GCTCTCGCCG GTGCTGGCCG GCGAGCAGAC CTTCGAGGAG
ATCGTGCTCA ACGATCTGAA CTGGTATGCG GAGAACGACA TCAAGCTGCT GCTCGGGCGC
AAGGTGGTCA AGATCGACCG CAAGCAGCGC CTGGTCATCG CCGATGATGG CAGCGAGGCC
GAGTACGACC GCCTGCTCAT CGCCACCGGT TCCAACCCCT TTATCCTGCC GATTCCGGGC
AAGGACCTGC AGGGCGTGAT CGGCTACCGC GACATCGCCG ACACCCAGAC CATGATGGAC
ACCGCCAAGA CCCACAAGCA CGCGGTGGTC ATCGGCGGCG GCCTGCTCGG CCTGGAGGCG
GCCAACGGCC TCAAGCTGCG CGGCATGGAC GTCACCGTGG TGCACCTCGG CGACTGGCTG
CTGGAGCGCC AGCTGGATCG CACCGCCGGC GAGCTGCTGC AGAAGTCCCT GGAAGACCGC
GGCCTGAAGT TCCTCCTGCC CAAGCACACC GCGGAACTGC TGGACAACGG CGAAGGCCGT
GTCTGCGCGG TGAAATTCAA GGACGGCGAG GTGATTCCCG CCGACCTGGT GGTGATGGCC
GCCGGTATCC GTCCCAACAC CGAACTGGCC GAGAGCGCCG GCATCGCCTG CAACCGCGGA
ATCCTAGTCA ATGACACCAT GCAGACCTTC GACCCGCGCG TTTACGCCAT CGGCGAATGC
GCCAGCCACC GCGGCATCGC CTACGGTCTG GTGGCGCCTT TGTTCGAGCA GGCCAAGGTC
TGCGCCAATC ACCTGGCCCA GCTCGGTTTC TCCCGCTACC AGGGCTCGGT GACCTCGACC
AAGCTCAAGG TCACCGGTAT CGATCTGTTC TCCGCCGGCG AATTCATGGG CGGCGAAGGT
ACCGAGACCA TCACCCTCTC CGACCCCATC GGCGGCGTGT ACAAGAAGCT GGTGATCAAG
GACGACGTGC TGGTCGGCGC CTGCCTGTAC GGCGATACCG CCGACGGCGG CTGGTACTTC
CGCCAGATCC GCGAGAGCCA CAACGTCAGC GAGATTCGCG ACCATCTGAT GTTCGGCGAA
GGCGCCATTG GCGACGTCGG CCACCAGGGC GCCGACAAGA CCGCCAACAT GCCCGACAGC
ATGGAAATCT GCGGCTGCAA CGGCGTATGC AAGGGCACCA TCGTCAAGGC CATCCAGGAG
AACGGCCTGT TCTCGGTCGA CGAGGTCAAG AAGCACACCA AGGCCGCCAG CTCCTGCGGC
TCCTGTGCCG GCCTGGTCGA GCAGATCCTG ATCAGCACCG TCGGCGGTGC CGCCGACGTC
AAACCCAAGA GCGAGAAGGC CATCTGCGGC TGCTCCGAGC TCAACCACGG GCAGATCCGC
AAGGCCATCC GCGAGCAGCA CCTGACGTCC ATGGCGCAGA CCATGGCGTT TCTCAACTGG
AGCACGCCCA ACGGCTGCGC CACCTGCCGC CCGGCGTTGA ACTACTACCT GATCTCCACC
TGGCCGGGCG AGGCCAAGGA CGACCCGCAA TCGCGCCTGA TCAACGAACG CGCCCACGCC
AATATCCAGA AGGACGGCAC CTACTCGGTG GTACCGCGCA TGTGGGGCGG CGTGACCAAC
CCGTCCGAGC TGCGCCGCAT CGCTGATGTC GCCGACAAGT ACAACGTACC CATGGTCAAG
GTCACCGGCG GCCAGCGCAT CGATCTGCTG GGTATCAAGA AGGACGATCT GCCGGCCGTG
TGGAAGGACC TGGACATGCC CTCCGGCCAC GCCTACGGCA AGTCCATCCG CACGGTGAAG
ACCTGCGTCG GCAGTGAGTT CTGCCGCTTC GGCACGCAGA ACTCCACCCA GCTCGGTATC
GACCTGGAGC ATGACCTGTT CAACATGTGG TCGCCGCACA AGGTCAAGCT GGCGGTCTCC
GGCTGCCCGC GCAACTGCGC CGAAGCCGGC ATCAAGGACG TCGGCATCAT CGGTGTGGAT
TCCGGCTTCG AGATGTACAT CGGTGGCAAC GGCGGGATCA AGACCGAGGT CGCCGAGTTC
TTCGTCAAGG TGAAGACCGC CGAAGAAGTG CGCGAATACA ACGCCGCCTT CCTCCAGCTG
TACCGCGAGG AGGCCTTCTA CCTGGAGCGC ACCGTGCACT ACATGCAGCG CGTCGGCATG
GAGCACATCA AGAAGGCGGT GCTGGAAGAC GAAGCCAACC GCAAGGCCCT GGCCGCGCGC
CTGCACTACG CCCTGTCGTT CGAGCAGGAC CCGTGGAAGG AGCGCATCGA GACGCCGCAA
CTGAAGAAAG AGTTCGACAC CATCAAGGTG GTGCAAATCG AGGAGGCCAC CGTATGA
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| Protein sequence | MQKLKLVMIG NGMAGVRTLE ELLKLAPDLY DITVFGAEPH PNYNRILLSP VLAGEQTFEE
IVLNDLNWYA ENDIKLLLGR KVVKIDRKQR LVIADDGSEA EYDRLLIATG SNPFILPIPG
KDLQGVIGYR DIADTQTMMD TAKTHKHAVV IGGGLLGLEA ANGLKLRGMD VTVVHLGDWL
LERQLDRTAG ELLQKSLEDR GLKFLLPKHT AELLDNGEGR VCAVKFKDGE VIPADLVVMA
AGIRPNTELA ESAGIACNRG ILVNDTMQTF DPRVYAIGEC ASHRGIAYGL VAPLFEQAKV
CANHLAQLGF SRYQGSVTST KLKVTGIDLF SAGEFMGGEG TETITLSDPI GGVYKKLVIK
DDVLVGACLY GDTADGGWYF RQIRESHNVS EIRDHLMFGE GAIGDVGHQG ADKTANMPDS
MEICGCNGVC KGTIVKAIQE NGLFSVDEVK KHTKAASSCG SCAGLVEQIL ISTVGGAADV
KPKSEKAICG CSELNHGQIR KAIREQHLTS MAQTMAFLNW STPNGCATCR PALNYYLIST
WPGEAKDDPQ SRLINERAHA NIQKDGTYSV VPRMWGGVTN PSELRRIADV ADKYNVPMVK
VTGGQRIDLL GIKKDDLPAV WKDLDMPSGH AYGKSIRTVK TCVGSEFCRF GTQNSTQLGI
DLEHDLFNMW SPHKVKLAVS GCPRNCAEAG IKDVGIIGVD SGFEMYIGGN GGIKTEVAEF
FVKVKTAEEV REYNAAFLQL YREEAFYLER TVHYMQRVGM EHIKKAVLED EANRKALAAR
LHYALSFEQD PWKERIETPQ LKKEFDTIKV VQIEEATV
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