Gene Pmen_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2065 
Symbol 
ID5109799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2287436 
End bp2288194 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID640503309 
Producthypothetical protein 
Protein accessionYP_001187558 
Protein GI146307093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.13247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0779555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC AGGCATTCGC CCAGGCCGAC CCCGAGTGGC TCAAGCTCAT CGGCGAGGCG 
CGCGACTGGC TTGCCGGGCC GCTCGGCCAG CTGTTGCTGG AGGAGGAGCG GCGCCTGCTG
GAGGAGGAAC TGGCGCGTTT CTTCGGCGGC TATCTGGTGA GCTACGGGCC AGGCGCCGAA
GGCCCGCCCA AGGCCGGACA GATTCAGCAC AACGTGCGCC TGGGTGCGCC GATGCCCGGC
GTGCAGATCG TCTGCGAGGA GCAGTCCTGG CCGCTGGGCG AGCACGCGGC CGATGTGGTG
GTGCTGCAGC ACGGTCTGGA CTTCTGTCTG TCGCCACACG GCTTGCTGCG CGAAGCGGCG
CGCAGCGTGC GGCCGGGCGG GCACCTGCTG ATTCTGGGTA TCCATCCCTG GAGCGGCTGG
GGCGCGCGGC GTCTGTTCGC GCAGGACGGG CTCAGGCAGG CGCGCTGCAT CTCCCCCAGT
CGAGTGGGTG ACTGGCTGAC GCTGCTGGGC TTTGCGTTGG AGAAACGGCG GTTCGGGTGC
TATCGTCCGC CGCTTGCGTC GCTCGCCTGG CAAATGCGCC TGCGGCGACT GGAGCGTTGG
GGGGAGGCCT GGCAACTGCC GGGGGCCGGC TTTTACCTGC TGGTAGCGCG CAAGCTGGTG
GTCGGTTTGC GGCCGCTGCG GCAATCGCGC CGTGAGCCGA TGGGCAAGCT GTTGCCATTG
CCGGTGGCCA AGATCAGCCG CCGCGACATC GATACCTGA
 
Protein sequence
MTDQAFAQAD PEWLKLIGEA RDWLAGPLGQ LLLEEERRLL EEELARFFGG YLVSYGPGAE 
GPPKAGQIQH NVRLGAPMPG VQIVCEEQSW PLGEHAADVV VLQHGLDFCL SPHGLLREAA
RSVRPGGHLL ILGIHPWSGW GARRLFAQDG LRQARCISPS RVGDWLTLLG FALEKRRFGC
YRPPLASLAW QMRLRRLERW GEAWQLPGAG FYLLVARKLV VGLRPLRQSR REPMGKLLPL
PVAKISRRDI DT