| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2059 |
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| Symbol | |
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| ID | 5109793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2278504 |
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| End bp | 2279577 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640503303 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001187552 |
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| Protein GI | 146307087 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.270311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.8272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCT ATATCATCCG CCGTCTGCTG CTCATCATCC CGACCCTGTT CGGCATTCTG
GTGATCAACT TCATCATCAT CCAGGCCGCC CCCGGCGGGC CGGTGGAGCA GATGATCGCC
AAGCTCGAAG GCTTCGATGG CGCCACCAGC CGCATCGCCG GCGGTGGTGC CGAGGTCTCG
GTGGCCGGCT CCAACTACCG CGGCGCCCAG GGCCTTGACC CGCAGCTGAT CGCCGAGATC
GAGAAGATGT ACGGCTTCGA CAAGTCGGCG CCGGAACGCT TCTGGATCAT GCTGAAGAAC
TACGCCCAGC TGGACTTCGG TGCCAGTTTC TTCCGCGATG CTCAGGTCAT CGACCTGATC
ATCGAGAAGA TGCCGGTGTC GATCTCGCTC GGACTATGGA GCACCCTGAT CATGTATCTG
GTCTCCATCC CTCTGGGCAT CGCCAAGGCT ACCCGCCACG GCAGCGCCTT CGACGTCTGG
ACCAGCTCGG CGATCATCGT CGGCTACGCC ATCCCGGCGT TCCTCTTCGC CATTCTGCTG
ATCGTGCTGT TTGCCGGGGG CAGCTACTGG GACTGGTTCC CGCTGCGCGG GCTGACCTCG
AACAACTTCG AGGAGCTCAG CTTAGGCGGC AAGATCCTCG ACTACCTCTG GCACCTGGTG
CTGCCAGTCA CTGCCCTGGT GATCGGCAAC TTCGCCACCC TGACCCTGCT GACCAAGAAC
AGCTTCCTCG ACGAGATCAA CAAGCAGTAC GTGATCACCG CCCGGGCCAA GGGCCTGACC
AACCATCGCG TGCTCTACGG CCATGTGTTT CGCAACGCCA TGCTGCTGAT CATCGCCGGT
TTCCCTGCCG CCTTCATCGG CATCTTCTTC ACCGGTTCCC TGCTGATCGA GGTCATCTTC
TCCCTCGACG GCCTGGGCCT GATGAGCTTC GAGGCAGCGA TCAACCGCGA CTATCCGGTG
GTGTTCGGCA CCCTGTTCAT CTTCACCTTG CTGGGGCTGA TCGTGAAACT GATCGGTGAC
ATCACCTACA CCCTGGTCGA TCCGCGCATC GACTTCGAAA GCCGGGAGGG TTGA
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| Protein sequence | MLAYIIRRLL LIIPTLFGIL VINFIIIQAA PGGPVEQMIA KLEGFDGATS RIAGGGAEVS
VAGSNYRGAQ GLDPQLIAEI EKMYGFDKSA PERFWIMLKN YAQLDFGASF FRDAQVIDLI
IEKMPVSISL GLWSTLIMYL VSIPLGIAKA TRHGSAFDVW TSSAIIVGYA IPAFLFAILL
IVLFAGGSYW DWFPLRGLTS NNFEELSLGG KILDYLWHLV LPVTALVIGN FATLTLLTKN
SFLDEINKQY VITARAKGLT NHRVLYGHVF RNAMLLIIAG FPAAFIGIFF TGSLLIEVIF
SLDGLGLMSF EAAINRDYPV VFGTLFIFTL LGLIVKLIGD ITYTLVDPRI DFESREG
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