| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2052 |
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| Symbol | |
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| ID | 5109786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2268376 |
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| End bp | 2270772 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640503296 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001187545 |
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| Protein GI | 146307080 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.155836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0687597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA CCATCGAATT GCCTCTCCTG CCGTTGCGCG ATGTTGTGGT CTATCCGCAC
ATGGTCATCC CGCTTTTCGT CGGGCGTGAG AAATCCATCG AGGCCCTCGA GGCAGCGATG
ACGGGCGACA AGCAGATTCT GCTGGTGGCC CAGAAGAACC CGGCCGTCGA CGATCCGGAT
GACCAGGATC TGTATCGCGT GGGTACCGTT GCCACCGTTC TGCAACTGCT CAAGCTGCCC
GACGGCACCG TGAAAGTGCT GGTCGAAGGT GAGCAGCGTG GCGCCATCGA GCGTTTCATC
GAACTCGATG ATCATTGCCG GGCCGAAGTC CAGCTGATCG AGGAGGGGGA TACTGCCGAG
CGCGAGTCGG AGGTATTCAC CCGCAGTCTG CTGAGCCAAT TCGAGCAGTA CGTGCAACTG
GGCAAGAAGG TGCCGGCCGA GGTGCTGTCG TCGCTCAACA GCATCGACGA GCCCAGCCGC
CTGGTCGACA CCATGGCGGC GCACATGGCG CTGAAGATCG AGCAGAAGCA GGAAATCCTC
GAGATCACCT CGCTGTCCGC TCGTGTCGAG CATGTACTGG CGCTGCTGGA TGCCGAGATC
GACCTGCTGC AGGTGGAAAA GCGCATCCGT GGCCGCGTGA AGAAGCAGAT GGAGCGCAGC
CAGCGCGAGT ACTACCTGAA TGAGCAGATG AAGGCCATTC AGAAGGAACT GGGCGATATC
GACGAAGGCC ACAACGAGAT CGACGAGCTG AAGAAGCGCA TCGACAACGC CGGCCTGACC
AAGGAGGCGC TGACCAAGGC CAATGCCGAG CTGAACAAGC TCAAGCAGAT GTCGCCAATG
TCCGCCGAAG CTACCGTCGT GCGCTCCTAC ATCGATTGGC TGGTCAATGT GCCGTGGAAG
GCCGAGAGCA AGGTGCGCCT GGATCTGGCG CGCGCAGAGA GCATTCTCGA TGCCGACCAT
TACGGCCTGG AAGAGGTCAA GGAGCGCATC CTCGAGTATC TCGCCGTGCA GAAACGGGTG
AAGAAACTCA AGGGGCCTGT GCTGTGCCTG GTTGGCCCGC CCGGCGTGGG CAAGACCTCG
CTGGCCGAGT CCATCGCCGC CGCGACCAAT CGCAAGTTCG TGCGCATGGC CCTCGGTGGC
GTGCGCGATG AGGCCGAGAT TCGCGGCCAC CGCCGTACCT ATATCGGCTC CATGCCGGGT
CGTCTGATCC AGAAGATGAC CAAGGTCGGC GTGCGCAACC CGCTGTTCCT GCTCGACGAG
ATCGACAAGA TGGGGCAGGA CATGCGCGGC GACCCCGCCT CGGCGCTGCT GGAAGTGCTC
GACCCCGAGC AGAACCACAA TTTCAACGAT CACTACCTGG AGGTCGATTA CGACCTGTCG
GACGTGATGT TCCTCTGCAC CGCCAACTCG ATGAGCATCC CCGGCCCGCT GCTGGACCGG
ATGGAAGTCA TCCGCCTGCC GGGTTACACC GAGGATGAGA AGGTCAATAT CGCCATCAAG
TATCTGGCGC CCAAGCAGAT CAAGGCCAAT GGCCTGAAGA AGGGCGAGCT TGAATTCGAA
GAGGCGGCCA TCCGCGACAT TATCCGCTAC TACACCCGCG AAGCGGGCGT GCGCAGTCTG
GAGCGGCAAA TCGCCAAGGT CTGCCGCAAG GCGGTGAAGG AACATGCCAG CGAGAAGCGC
TTCCAGGTGC GGGTGACGGC CGATTCGCTG GAGCACTTCC TCGGCGTACG CAAGCACCGT
TATGGTCTTG CCGAGCAGCA GGATCAGATC GGTCAGGTGA CCGGGCTGGC CTGGACGCAG
GTCGGTGGGG AGTTGCTCAC CATCGAGACC GCGGTGGTGC CGGGCAAGGG CAATCTGATC
AAGACCGGTT CGCTGGGTGA TGTCATGGCC GAGTCCATGA CGGCAGCCAT GACCGTGGTG
CGTAGCCGGG CCAAGAGTCT GGGGATCCCT GCGGATTTCA ACGAGAAGCG CGACGTTCAC
ATCCATATGC CCGAAGGTGC TACGCCCAAG GATGGACCGA GCGCGGGCAT TGGTTTGTGC
ACGGCACTGG TTTCGGCGCT GACACAGATT CCGGTGCGGG CGGACGTGGC CATGACCGGT
GAGATCACCC TGCGTGGTCA GGTATTGGCC ATCGGCGGTC TCAAGGAAAA ACTTCTGGCT
GCTCACCGGG GTGGGATCAA GACCGTGATC ATTCCCGAAG AAAATGTGCG TGACCTGAAA
GAAATTCCGG AAAATATTAA GCAAGACCTG CAGATTAAAC CGGTTAAATG GATTGACGAG
GTCCTGCAAA TTGCGCTGCA ATACGCCCCG GAGCCCTTGC CCGATGCGGC TCCGGAGATG
GTTGCAACGG ATGACAAGCG CGAGTCTGAT TCCAAGGAGC GAATCAGCAC GCATTAG
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| Protein sequence | MKTTIELPLL PLRDVVVYPH MVIPLFVGRE KSIEALEAAM TGDKQILLVA QKNPAVDDPD
DQDLYRVGTV ATVLQLLKLP DGTVKVLVEG EQRGAIERFI ELDDHCRAEV QLIEEGDTAE
RESEVFTRSL LSQFEQYVQL GKKVPAEVLS SLNSIDEPSR LVDTMAAHMA LKIEQKQEIL
EITSLSARVE HVLALLDAEI DLLQVEKRIR GRVKKQMERS QREYYLNEQM KAIQKELGDI
DEGHNEIDEL KKRIDNAGLT KEALTKANAE LNKLKQMSPM SAEATVVRSY IDWLVNVPWK
AESKVRLDLA RAESILDADH YGLEEVKERI LEYLAVQKRV KKLKGPVLCL VGPPGVGKTS
LAESIAAATN RKFVRMALGG VRDEAEIRGH RRTYIGSMPG RLIQKMTKVG VRNPLFLLDE
IDKMGQDMRG DPASALLEVL DPEQNHNFND HYLEVDYDLS DVMFLCTANS MSIPGPLLDR
MEVIRLPGYT EDEKVNIAIK YLAPKQIKAN GLKKGELEFE EAAIRDIIRY YTREAGVRSL
ERQIAKVCRK AVKEHASEKR FQVRVTADSL EHFLGVRKHR YGLAEQQDQI GQVTGLAWTQ
VGGELLTIET AVVPGKGNLI KTGSLGDVMA ESMTAAMTVV RSRAKSLGIP ADFNEKRDVH
IHMPEGATPK DGPSAGIGLC TALVSALTQI PVRADVAMTG EITLRGQVLA IGGLKEKLLA
AHRGGIKTVI IPEENVRDLK EIPENIKQDL QIKPVKWIDE VLQIALQYAP EPLPDAAPEM
VATDDKRESD SKERISTH
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