| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2050 |
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| Symbol | clpP |
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| ID | 5109784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2266197 |
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| End bp | 2266838 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640503294 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001187543 |
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| Protein GI | 146307078 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.230324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.248457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCA ATCCTTTTAT GCAAAACATG CCTGAAATCC AGGCCGCTGG CGGCCTGGTG
CCGATGGTCA TCGAGCAGTC CGCTCGTGGC GAGCGTGCCT ACGACATCTA CTCGCGCCTG
CTCAAGGAGC GCGTGATTTT CCTGGTCGGC CAGGTCGAGG ACTACATGGC CAACCTGATC
TGCGCCCAGT TGCTGTTTCT GGAGGCAGAA AACCCGGACA AGGACATTCA CCTGTACATC
AACTCACCAG GTGGCTCGGT GACAGCCGGC ATGGCGATCT ACGACACCAT GCAGTTCATC
AAGGCAGACG TGTCCACCAC CTGCATCGGT CAGGCCTGCA GCATGGGTGC CTTCCTGCTG
GCCGGTGGGG CCAAGGGCAA GCGCTTCTGC CTGCCGAACT CGCGCGTGAT GATTCACCAG
CCGCTGGGTG GCTTCCAGGG CCAGGCCTCG GATATCGAGA TCCATGCCAA GGAAATTCTC
TTCATTCGTG AGCGTCTGAA CGAACTGCTG GCCCATCACA CCGGTCAGAG CCTGGAAACC
ATCGAGCGCG ACACCAACCG CGACAATTTC ATGAGCGCTC CGCGCGCCGT GGAGTACGGC
ATCGTCGATG CCGTTCACGA AAAGCGTCAA ATGCCGGTGT AG
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| Protein sequence | MSRNPFMQNM PEIQAAGGLV PMVIEQSARG ERAYDIYSRL LKERVIFLVG QVEDYMANLI
CAQLLFLEAE NPDKDIHLYI NSPGGSVTAG MAIYDTMQFI KADVSTTCIG QACSMGAFLL
AGGAKGKRFC LPNSRVMIHQ PLGGFQGQAS DIEIHAKEIL FIRERLNELL AHHTGQSLET
IERDTNRDNF MSAPRAVEYG IVDAVHEKRQ MPV
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