| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2030 |
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| Symbol | |
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| ID | 5109921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2242923 |
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| End bp | 2244857 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503271 |
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| Product | 3-methylcrotonoyl-CoA carboxylase, alpha subunit |
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| Protein accession | YP_001187523 |
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| Protein GI | 146307058 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0317693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.435789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCA AGCCTATCGA CACCCTGCTG GTGGCCAACC GCGGCGAGAT CGCCTGCCGC
GTGATGCGCA CGGCCAAGGC CATGGGCATC CGTACCGTGG CGGTGCACAG CGCCATCGAT
GCCACGGCGC GGCATGTGCG CGAGGCCGAC CTGGCGGTGA ATCTGGGCGG CGCCAAGCCG
GCGGAAAGCT ACCTCTTGAT CGACAAGCTG ATCGACGCGG CCAGGGCCAG CGGCGCCCAG
GCCATCCACC CCGGCTACGG CTTTCTCTCG GAAAACGCCG GCTTCGCCCG CGCCATCGAA
GAAGCCGGGC TGATCTTCCT CGGCCCGCCC GCCTCGGCCA TCGACGCCAT GGGCAGCAAG
TCCGCGGCCA AGGCGCTGAT GGAGGCCGCC GGCGTGCCGC TGGTGCCGGG CTATCACGGC
GAAGCGCAGG ATATCGACAC CTTCCGCCAG GCCGCCGAGC GCATCGGCTA CCCGGTGCTG
CTCAAGGCCG CCGCCGGCGG TGGTGGCAAG GGCATGAAGG TGGTCGAGCG CGAAAGCGAG
CTGGCCGAGG CCCTGGCCAG CGCCCAGCGC GAGGCGCAGT CGTCGTTCGG CGACTCGCGC
ATGCTGGTGG AGAAATACAT ACTCAAGCCG CGCCACGTGG AGATCCAGGT ATTTGCCGAC
CAGCACGGCC ACTGCCTGTA CCTGAACGAA CGCGACTGCT CGATCCAGCG CCGCCACCAG
AAGGTGGTGG AAGAAGCCCC CGCCCCCGGC CTGTCACCCG AATTGCGCCG CGCCATGGGC
GAGGCGGCGG TCAAGGCCGC CCAGGCCATC GGCTACGTCG GCGCCGGCAC CGTGGAGTTT
TTGCTGGATG AGCGCGGCGA CTTCTTCTTT ATGGAGATGA ACACCCGCCT GCAGGTGGAA
CATCCGGTCA CCGAGCTGAT CACCGGCCTG GACCTGGTGG CCTGGCAGAT TCGCGTCGCC
CGCGGCGAGG CGCTGCCGGT CACGCAGGAA CAAGTGCCGC TTAACGGCCA CGCCATCGAG
GTACGCCTGT ACGCGGAAGA TCCGGACCAC GACTTCCTCC CGGCCACCGG CACCCTGCAG
TTGTACCGCG AAGCCGCCGC CGGCCCCGGC CGGCGCACCG ACAGCGGCGT GGCCCAGGGC
GATGTGGTCT CGCCCTTTTA CGACCCCATG CTCGGCAAGG TCATCGCCTG GGGCGAGAAC
CGCGAGGAAG CGCGCCTGCG CCTGCTCGCC ATGCTCGACG AAACCCTGGT CGGCGGGGTC
AAGACCAATC TGGCCTTCCT GCGTCGCGTG CTGGCCCACC CGGCCTTCGC CGCCGCCGAG
CTGGACACCG GCTTTATCCC GCGTCACGAG GCGCAGCTGC TGCCGCCGCC GAGCGAACTG
CCGGAGGCCT TCTGGCAGCT GGCGGCCGAT GCCTTTATCC AGAGCGAAGC CGCACGCCGC
CGCGCCGACG ATGCCCATTC GCCCTGGGCC GCGCGCAGCG GCTGGCGCAG CGGCGGCCCG
GCGGAGGTCG AGCTGCACCT GAGCTGCCAG GGCAGCAGCC GCAAGGTGCG CGCCAGCGGC
CAGACGCAGC TGCAGGGCGA CAGCCTGCTG GTGCCCGGCG CGGCGCAGCA GCGCCTGCCC
GCGGTCCGCC AGGGCGACAC CCTGTACCTG CAATGGCAGG GCGAACTGCA TGCGGTAAGC
CGCTTCGACC CGATCGCCGC CGCCGAGGCC AGCCATCATC AGCACGGCGG CCTGACCGCG
CCGATGAACG GCAGCATCGT CCGCGTGCTG GTCGAGCCGG GCCAGGCCGT GGAGGCCGGC
ACCGCCCTGG TGGTGCTGGA GGCGATGAAG ATGGAGCACA GCATCCGCGC GCCCGAGGCC
GGCACGGTCA AGGCCATCTA CTGCCGCGAA GGCGAGCTGG TCAGCGACGG CGCGGTGCTG
GTGGAGATCG AGTAG
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| Protein sequence | MNFKPIDTLL VANRGEIACR VMRTAKAMGI RTVAVHSAID ATARHVREAD LAVNLGGAKP
AESYLLIDKL IDAARASGAQ AIHPGYGFLS ENAGFARAIE EAGLIFLGPP ASAIDAMGSK
SAAKALMEAA GVPLVPGYHG EAQDIDTFRQ AAERIGYPVL LKAAAGGGGK GMKVVERESE
LAEALASAQR EAQSSFGDSR MLVEKYILKP RHVEIQVFAD QHGHCLYLNE RDCSIQRRHQ
KVVEEAPAPG LSPELRRAMG EAAVKAAQAI GYVGAGTVEF LLDERGDFFF MEMNTRLQVE
HPVTELITGL DLVAWQIRVA RGEALPVTQE QVPLNGHAIE VRLYAEDPDH DFLPATGTLQ
LYREAAAGPG RRTDSGVAQG DVVSPFYDPM LGKVIAWGEN REEARLRLLA MLDETLVGGV
KTNLAFLRRV LAHPAFAAAE LDTGFIPRHE AQLLPPPSEL PEAFWQLAAD AFIQSEAARR
RADDAHSPWA ARSGWRSGGP AEVELHLSCQ GSSRKVRASG QTQLQGDSLL VPGAAQQRLP
AVRQGDTLYL QWQGELHAVS RFDPIAAAEA SHHQHGGLTA PMNGSIVRVL VEPGQAVEAG
TALVVLEAMK MEHSIRAPEA GTVKAIYCRE GELVSDGAVL VEIE
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